Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.49□□□□□ -0.25
Spg11Q3UHA3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Gm13612-201ENSMUST00000119276 390 ntBASIC13.49□□□□□ -0.25
Spg11Q3UHA3 B9d1os-201ENSMUST00000137010 674 ntBASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Gm43818-201ENSMUST00000200605 466 ntBASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.49□□□□□ -0.25
Spg11Q3UHA3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Gm11628-201ENSMUST00000117568 171 ntBASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Gm16177-201ENSMUST00000120728 718 ntBASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.48□□□□□ -0.25
Spg11Q3UHA3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Gm17795-201ENSMUST00000214505 757 ntBASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Spg11Q3UHA3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.47□□□□□ -0.25
Spg11Q3UHA3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms