Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col5a2Q3U962 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col5a2Q3U962 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col5a2Q3U962 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col5a2Q3U962 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col5a2Q3U962 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.34■□□□□ 0.37
Col5a2Q3U962 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Col5a2Q3U962 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Col5a2Q3U962 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col5a2Q3U962 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col5a2Q3U962 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col5a2Q3U962 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col5a2Q3U962 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col5a2Q3U962 Gm29127-201ENSMUST00000188304 517 ntBASIC17.33■□□□□ 0.37
Col5a2Q3U962 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.33■□□□□ 0.37
Col5a2Q3U962 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col5a2Q3U962 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col5a2Q3U962 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col5a2Q3U962 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col5a2Q3U962 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col5a2Q3U962 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col5a2Q3U962 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Col5a2Q3U962 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col5a2Q3U962 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.33■□□□□ 0.36
Col5a2Q3U962 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col5a2Q3U962 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.32■□□□□ 0.36
Col5a2Q3U962 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col5a2Q3U962 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.32■□□□□ 0.36
Col5a2Q3U962 Gm10275-202ENSMUST00000168697 495 ntBASIC17.32■□□□□ 0.36
Col5a2Q3U962 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Col5a2Q3U962 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.32■□□□□ 0.36
Col5a2Q3U962 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col5a2Q3U962 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col5a2Q3U962 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col5a2Q3U962 Gm10275-201ENSMUST00000092620 635 ntBASIC17.32■□□□□ 0.36
Col5a2Q3U962 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col5a2Q3U962 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col5a2Q3U962 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col5a2Q3U962 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col5a2Q3U962 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col5a2Q3U962 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col5a2Q3U962 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col5a2Q3U962 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Col5a2Q3U962 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.32■□□□□ 0.36
Col5a2Q3U962 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col5a2Q3U962 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col5a2Q3U962 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.31■□□□□ 0.36
Col5a2Q3U962 Gm15240-201ENSMUST00000118156 720 ntBASIC17.31■□□□□ 0.36
Col5a2Q3U962 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Gm7561-201ENSMUST00000211203 886 ntBASIC17.31■□□□□ 0.36
Col5a2Q3U962 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col5a2Q3U962 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col5a2Q3U962 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.31■□□□□ 0.36
Col5a2Q3U962 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.31■□□□□ 0.36
Col5a2Q3U962 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Gm43179-201ENSMUST00000198797 275 ntBASIC17.31■□□□□ 0.36
Col5a2Q3U962 AC156560.2-201ENSMUST00000221232 264 ntBASIC17.31■□□□□ 0.36
Col5a2Q3U962 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC17.31■□□□□ 0.36
Col5a2Q3U962 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.31■□□□□ 0.36
Col5a2Q3U962 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.31■□□□□ 0.36
Col5a2Q3U962 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col5a2Q3U962 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col5a2Q3U962 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col5a2Q3U962 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col5a2Q3U962 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col5a2Q3U962 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col5a2Q3U962 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col5a2Q3U962 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col5a2Q3U962 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Col5a2Q3U962 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col5a2Q3U962 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Col5a2Q3U962 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.3■□□□□ 0.36
Col5a2Q3U962 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Col5a2Q3U962 Gm11814-201ENSMUST00000119515 929 ntBASIC17.3■□□□□ 0.36
Col5a2Q3U962 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.3■□□□□ 0.36
Col5a2Q3U962 Gm24196-201ENSMUST00000179161 110 ntBASIC17.3■□□□□ 0.36
Col5a2Q3U962 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Col5a2Q3U962 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col5a2Q3U962 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col5a2Q3U962 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col5a2Q3U962 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col5a2Q3U962 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms