Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Tfap2a-203ENSMUST00000223869 2037 ntBASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Gm25880-201ENSMUST00000104331 132 ntBASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 n-R5s195-201ENSMUST00000082891 119 ntBASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Gm14726-201ENSMUST00000120623 896 ntBASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Gm43610-201ENSMUST00000199117 365 ntBASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ush2AQ2QI47 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Gm9678-201ENSMUST00000198979 1149 ntBASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Gm6580-201ENSMUST00000117504 1357 ntBASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Gm12012-201ENSMUST00000118857 1066 ntBASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 CT010486.3-201ENSMUST00000224555 811 ntBASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ush2AQ2QI47 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Gm12029-201ENSMUST00000120073 832 ntBASIC7.67□□□□□ -1.18
Ush2AQ2QI47 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms