Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hspg2Q05793 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hspg2Q05793 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.71□□□□□ -0.69
Hspg2Q05793 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.71□□□□□ -0.69
Hspg2Q05793 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.71□□□□□ -0.69
Hspg2Q05793 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hspg2Q05793 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.71□□□□□ -0.69
Hspg2Q05793 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC10.71□□□□□ -0.69
Hspg2Q05793 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hspg2Q05793 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC10.71□□□□□ -0.69
Hspg2Q05793 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hspg2Q05793 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hspg2Q05793 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Hspg2Q05793 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hspg2Q05793 Gm13350-201ENSMUST00000120519 479 ntBASIC10.71□□□□□ -0.69
Hspg2Q05793 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.71□□□□□ -0.69
Hspg2Q05793 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hspg2Q05793 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hspg2Q05793 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC10.71□□□□□ -0.7
Hspg2Q05793 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Hspg2Q05793 Gm5763-201ENSMUST00000155951 1530 ntBASIC10.71□□□□□ -0.7
Hspg2Q05793 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.71□□□□□ -0.7
Hspg2Q05793 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hspg2Q05793 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hspg2Q05793 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Hspg2Q05793 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Hspg2Q05793 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Hspg2Q05793 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.71□□□□□ -0.7
Hspg2Q05793 Gm27731-201ENSMUST00000185192 107 ntBASIC10.71□□□□□ -0.7
Hspg2Q05793 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hspg2Q05793 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hspg2Q05793 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hspg2Q05793 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hspg2Q05793 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hspg2Q05793 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Hspg2Q05793 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hspg2Q05793 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hspg2Q05793 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Hspg2Q05793 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Hspg2Q05793 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 Gm43548-201ENSMUST00000197139 2353 ntBASIC10.7□□□□□ -0.7
Hspg2Q05793 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.7□□□□□ -0.7
Hspg2Q05793 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.7□□□□□ -0.7
Hspg2Q05793 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.7□□□□□ -0.7
Hspg2Q05793 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.7□□□□□ -0.7
Hspg2Q05793 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Hspg2Q05793 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.7□□□□□ -0.7
Hspg2Q05793 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Hspg2Q05793 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.7□□□□□ -0.7
Hspg2Q05793 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.7□□□□□ -0.7
Hspg2Q05793 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.7□□□□□ -0.7
Hspg2Q05793 Gm8463-201ENSMUST00000208573 613 ntBASIC10.7□□□□□ -0.7
Hspg2Q05793 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.7□□□□□ -0.7
Hspg2Q05793 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Hspg2Q05793 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Hspg2Q05793 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hspg2Q05793 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.69□□□□□ -0.7
Hspg2Q05793 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC10.69□□□□□ -0.7
Hspg2Q05793 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.69□□□□□ -0.7
Hspg2Q05793 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC10.69□□□□□ -0.7
Hspg2Q05793 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.69□□□□□ -0.7
Hspg2Q05793 Gm10012-201ENSMUST00000078252 192 ntBASIC10.69□□□□□ -0.7
Hspg2Q05793 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Hspg2Q05793 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.69□□□□□ -0.7
Hspg2Q05793 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.69□□□□□ -0.7
Hspg2Q05793 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC10.69□□□□□ -0.7
Hspg2Q05793 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms