Protein–RNA interactions for Protein: Q00288

Pax8, Paired box protein Pax-8, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax8Q00288 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pax8Q00288 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.58□□□□□ -0.39
Pax8Q00288 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Pax8Q00288 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pax8Q00288 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pax8Q00288 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.58□□□□□ -0.4
Pax8Q00288 Gm26308-201ENSMUST00000157768 69 ntBASIC12.58□□□□□ -0.4
Pax8Q00288 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.58□□□□□ -0.4
Pax8Q00288 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pax8Q00288 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.58□□□□□ -0.4
Pax8Q00288 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.58□□□□□ -0.4
Pax8Q00288 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pax8Q00288 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pax8Q00288 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pax8Q00288 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.58□□□□□ -0.4
Pax8Q00288 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pax8Q00288 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Pax8Q00288 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.57□□□□□ -0.4
Pax8Q00288 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.57□□□□□ -0.4
Pax8Q00288 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.57□□□□□ -0.4
Pax8Q00288 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.57□□□□□ -0.4
Pax8Q00288 Gm13464-201ENSMUST00000119418 935 ntBASIC12.57□□□□□ -0.4
Pax8Q00288 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.57□□□□□ -0.4
Pax8Q00288 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Pax8Q00288 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Pax8Q00288 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Pax8Q00288 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.57□□□□□ -0.4
Pax8Q00288 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.57□□□□□ -0.4
Pax8Q00288 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Pax8Q00288 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Pax8Q00288 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.57□□□□□ -0.4
Pax8Q00288 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pax8Q00288 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pax8Q00288 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pax8Q00288 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pax8Q00288 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pax8Q00288 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pax8Q00288 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pax8Q00288 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pax8Q00288 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pax8Q00288 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pax8Q00288 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pax8Q00288 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pax8Q00288 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.56□□□□□ -0.4
Pax8Q00288 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pax8Q00288 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pax8Q00288 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pax8Q00288 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pax8Q00288 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.56□□□□□ -0.4
Pax8Q00288 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.56□□□□□ -0.4
Pax8Q00288 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pax8Q00288 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pax8Q00288 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
Pax8Q00288 Mir6990-201ENSMUST00000183724 91 ntBASIC12.56□□□□□ -0.4
Pax8Q00288 Gm27920-201ENSMUST00000183953 96 ntBASIC12.56□□□□□ -0.4
Pax8Q00288 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms