Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.22□□□□□ -0.45
Gfra1P97785 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gfra1P97785 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Gfra1P97785 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gfra1P97785 Gm43125-201ENSMUST00000201724 730 ntBASIC12.22□□□□□ -0.45
Gfra1P97785 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.22□□□□□ -0.45
Gfra1P97785 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gfra1P97785 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gfra1P97785 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gfra1P97785 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gfra1P97785 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gfra1P97785 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.22□□□□□ -0.45
Gfra1P97785 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gfra1P97785 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gfra1P97785 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gfra1P97785 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gfra1P97785 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Gfra1P97785 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gfra1P97785 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Gfra1P97785 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gfra1P97785 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.22□□□□□ -0.45
Gfra1P97785 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Gfra1P97785 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gfra1P97785 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.21□□□□□ -0.45
Gfra1P97785 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
Gfra1P97785 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Gfra1P97785 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.21□□□□□ -0.45
Gfra1P97785 Gm25925-201ENSMUST00000158314 306 ntBASIC12.21□□□□□ -0.45
Gfra1P97785 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.21□□□□□ -0.45
Gfra1P97785 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Gfra1P97785 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Gfra1P97785 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.21□□□□□ -0.45
Gfra1P97785 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Gfra1P97785 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.21□□□□□ -0.45
Gfra1P97785 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gfra1P97785 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gfra1P97785 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Gfra1P97785 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gfra1P97785 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gfra1P97785 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gfra1P97785 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.21□□□□□ -0.46
Gfra1P97785 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gfra1P97785 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gfra1P97785 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Gfra1P97785 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gfra1P97785 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.21□□□□□ -0.46
Gfra1P97785 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gfra1P97785 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gfra1P97785 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.21□□□□□ -0.46
Gfra1P97785 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Gfra1P97785 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Gfra1P97785 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gfra1P97785 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Gfra1P97785 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gfra1P97785 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gfra1P97785 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gfra1P97785 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gfra1P97785 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gfra1P97785 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gfra1P97785 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Gfra1P97785 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gfra1P97785 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gfra1P97785 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gfra1P97785 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gfra1P97785 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Gfra1P97785 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gfra1P97785 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Gfra1P97785 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Gfra1P97785 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.2□□□□□ -0.46
Gfra1P97785 Gm6973-201ENSMUST00000117080 721 ntBASIC12.2□□□□□ -0.46
Gfra1P97785 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gfra1P97785 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.2□□□□□ -0.46
Gfra1P97785 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.2□□□□□ -0.46
Gfra1P97785 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.2□□□□□ -0.46
Gfra1P97785 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.2□□□□□ -0.46
Gfra1P97785 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gfra1P97785 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gfra1P97785 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gfra1P97785 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms