Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Npas1P97459 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.43□□□□□ -0.42
Npas1P97459 Gm6623-201ENSMUST00000173570 544 ntBASIC12.43□□□□□ -0.42
Npas1P97459 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.43□□□□□ -0.42
Npas1P97459 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Npas1P97459 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.42□□□□□ -0.42
Npas1P97459 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Npas1P97459 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.42□□□□□ -0.42
Npas1P97459 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Npas1P97459 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.42□□□□□ -0.42
Npas1P97459 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.42□□□□□ -0.42
Npas1P97459 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Npas1P97459 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.42□□□□□ -0.42
Npas1P97459 Gm6345-202ENSMUST00000180900 204 ntBASIC12.42□□□□□ -0.42
Npas1P97459 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.42□□□□□ -0.42
Npas1P97459 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Npas1P97459 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Npas1P97459 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Npas1P97459 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npas1P97459 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Npas1P97459 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Npas1P97459 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Npas1P97459 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Npas1P97459 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.41□□□□□ -0.42
Npas1P97459 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Npas1P97459 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Npas1P97459 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Gm25406-201ENSMUST00000157599 105 ntBASIC12.41□□□□□ -0.42
Npas1P97459 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Npas1P97459 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Npas1P97459 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Npas1P97459 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Npas1P97459 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Npas1P97459 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Npas1P97459 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms