Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1aP97445 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cacna1aP97445 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.64□□□□□ -0.23
Cacna1aP97445 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.63□□□□□ -0.23
Cacna1aP97445 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cacna1aP97445 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cacna1aP97445 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Gm5479-201ENSMUST00000160578 435 ntBASIC13.63□□□□□ -0.23
Cacna1aP97445 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Cacna1aP97445 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.63□□□□□ -0.23
Cacna1aP97445 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cacna1aP97445 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.63□□□□□ -0.23
Cacna1aP97445 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.63□□□□□ -0.23
Cacna1aP97445 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cacna1aP97445 Gm11918-201ENSMUST00000121660 179 ntBASIC13.63□□□□□ -0.23
Cacna1aP97445 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cacna1aP97445 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.63□□□□□ -0.23
Cacna1aP97445 Gm18018-201ENSMUST00000198273 408 ntBASIC13.63□□□□□ -0.23
Cacna1aP97445 Gm45668-201ENSMUST00000211271 493 ntBASIC13.63□□□□□ -0.23
Cacna1aP97445 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cacna1aP97445 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cacna1aP97445 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.62□□□□□ -0.23
Cacna1aP97445 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cacna1aP97445 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cacna1aP97445 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.62□□□□□ -0.23
Cacna1aP97445 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.62□□□□□ -0.23
Cacna1aP97445 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.62□□□□□ -0.23
Cacna1aP97445 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.62□□□□□ -0.23
Cacna1aP97445 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cacna1aP97445 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.62□□□□□ -0.23
Cacna1aP97445 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.62□□□□□ -0.23
Cacna1aP97445 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cacna1aP97445 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.61□□□□□ -0.23
Cacna1aP97445 Gm12742-201ENSMUST00000117326 410 ntBASIC13.61□□□□□ -0.23
Cacna1aP97445 Gm12957-201ENSMUST00000117835 377 ntBASIC13.61□□□□□ -0.23
Cacna1aP97445 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.61□□□□□ -0.23
Cacna1aP97445 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.61□□□□□ -0.23
Cacna1aP97445 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.61□□□□□ -0.23
Cacna1aP97445 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cacna1aP97445 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cacna1aP97445 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.61□□□□□ -0.23
Cacna1aP97445 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Gm21854-201ENSMUST00000179901 471 ntBASIC13.61□□□□□ -0.23
Cacna1aP97445 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.61□□□□□ -0.23
Cacna1aP97445 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cacna1aP97445 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms