Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nkx2-3P97334 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-3P97334 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nkx2-3P97334 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.5■□□□□ 0.55
Nkx2-3P97334 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-3P97334 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nkx2-3P97334 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx2-3P97334 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Gm10275-202ENSMUST00000168697 495 ntBASIC18.49■□□□□ 0.55
Nkx2-3P97334 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC18.49■□□□□ 0.55
Nkx2-3P97334 Gm45668-201ENSMUST00000211271 493 ntBASIC18.49■□□□□ 0.55
Nkx2-3P97334 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC18.49■□□□□ 0.55
Nkx2-3P97334 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Gm10275-201ENSMUST00000092620 635 ntBASIC18.49■□□□□ 0.55
Nkx2-3P97334 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx2-3P97334 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-3P97334 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-3P97334 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Gm9182-201ENSMUST00000217829 639 ntBASIC18.48■□□□□ 0.55
Nkx2-3P97334 Gm9797-201ENSMUST00000052902 613 ntBASIC18.48■□□□□ 0.55
Nkx2-3P97334 Carlr-201ENSMUST00000181515 2574 ntBASIC18.48■□□□□ 0.55
Nkx2-3P97334 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx2-3P97334 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nkx2-3P97334 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC18.47■□□□□ 0.55
Nkx2-3P97334 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 AC121804.3-201ENSMUST00000223420 295 ntBASIC18.47■□□□□ 0.55
Nkx2-3P97334 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx2-3P97334 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx2-3P97334 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms