Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabra1P62812 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabra1P62812 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gabra1P62812 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.47□□□□□ -0.41
Gabra1P62812 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.47□□□□□ -0.41
Gabra1P62812 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Gabra1P62812 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.47□□□□□ -0.41
Gabra1P62812 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gabra1P62812 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabra1P62812 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabra1P62812 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabra1P62812 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gabra1P62812 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Gabra1P62812 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gabra1P62812 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.46□□□□□ -0.41
Gabra1P62812 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Gabra1P62812 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gabra1P62812 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gabra1P62812 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Gabra1P62812 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.46□□□□□ -0.41
Gabra1P62812 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Gabra1P62812 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Gabra1P62812 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gabra1P62812 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gabra1P62812 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.46□□□□□ -0.42
Gabra1P62812 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Gabra1P62812 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gabra1P62812 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Gabra1P62812 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gabra1P62812 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gabra1P62812 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gabra1P62812 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gabra1P62812 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gabra1P62812 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gabra1P62812 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Gabra1P62812 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gabra1P62812 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gabra1P62812 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.42
Gabra1P62812 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gabra1P62812 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Gabra1P62812 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.45□□□□□ -0.42
Gabra1P62812 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Gabra1P62812 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.45□□□□□ -0.42
Gabra1P62812 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Gabra1P62812 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Gabra1P62812 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.45□□□□□ -0.42
Gabra1P62812 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Gabra1P62812 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.45□□□□□ -0.42
Gabra1P62812 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Gabra1P62812 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gabra1P62812 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Gabra1P62812 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Gabra1P62812 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gabra1P62812 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.44□□□□□ -0.42
Gabra1P62812 Acot6-202ENSMUST00000222921 3622 ntBASIC12.44□□□□□ -0.42
Gabra1P62812 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gabra1P62812 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gabra1P62812 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gabra1P62812 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gabra1P62812 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gabra1P62812 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gabra1P62812 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gabra1P62812 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gabra1P62812 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms