Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sf3b6P59708 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.13□□□□□ -0.31
Sf3b6P59708 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
Sf3b6P59708 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.13□□□□□ -0.31
Sf3b6P59708 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Gm12895-201ENSMUST00000122214 226 ntBASIC13.13□□□□□ -0.31
Sf3b6P59708 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.13□□□□□ -0.31
Sf3b6P59708 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.13□□□□□ -0.31
Sf3b6P59708 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.13□□□□□ -0.31
Sf3b6P59708 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.13□□□□□ -0.31
Sf3b6P59708 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Sf3b6P59708 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.13□□□□□ -0.31
Sf3b6P59708 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sf3b6P59708 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.12□□□□□ -0.31
Sf3b6P59708 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.12□□□□□ -0.31
Sf3b6P59708 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.12□□□□□ -0.31
Sf3b6P59708 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.12□□□□□ -0.31
Sf3b6P59708 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sf3b6P59708 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Gm15372-201ENSMUST00000120729 834 ntBASIC13.12□□□□□ -0.31
Sf3b6P59708 Gm12497-201ENSMUST00000138778 237 ntBASIC13.12□□□□□ -0.31
Sf3b6P59708 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.12□□□□□ -0.31
Sf3b6P59708 Gm10499-201ENSMUST00000174094 934 ntBASIC13.12□□□□□ -0.31
Sf3b6P59708 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.12□□□□□ -0.31
Sf3b6P59708 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.12□□□□□ -0.31
Sf3b6P59708 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sf3b6P59708 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.12□□□□□ -0.31
Sf3b6P59708 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Sf3b6P59708 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sf3b6P59708 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.12□□□□□ -0.31
Sf3b6P59708 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sf3b6P59708 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sf3b6P59708 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sf3b6P59708 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Sf3b6P59708 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sf3b6P59708 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Sf3b6P59708 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.11□□□□□ -0.31
Sf3b6P59708 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sf3b6P59708 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.11□□□□□ -0.31
Sf3b6P59708 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.11□□□□□ -0.31
Sf3b6P59708 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sf3b6P59708 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.11□□□□□ -0.31
Sf3b6P59708 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sf3b6P59708 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms