Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nphp4P59240 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nphp4P59240 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Nphp4P59240 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nphp4P59240 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nphp4P59240 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC19.87■□□□□ 0.77
Nphp4P59240 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nphp4P59240 Gm15957-201ENSMUST00000118893 974 ntBASIC19.87■□□□□ 0.77
Nphp4P59240 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC19.87■□□□□ 0.77
Nphp4P59240 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nphp4P59240 Gm33320-201ENSMUST00000192232 530 ntBASIC19.87■□□□□ 0.77
Nphp4P59240 Gm5186-201ENSMUST00000218781 920 ntBASIC19.87■□□□□ 0.77
Nphp4P59240 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nphp4P59240 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nphp4P59240 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC19.87■□□□□ 0.77
Nphp4P59240 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nphp4P59240 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nphp4P59240 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nphp4P59240 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Nphp4P59240 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.87■□□□□ 0.77
Nphp4P59240 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nphp4P59240 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nphp4P59240 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nphp4P59240 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC19.86■□□□□ 0.77
Nphp4P59240 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC19.86■□□□□ 0.77
Nphp4P59240 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Nphp4P59240 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nphp4P59240 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC19.86■□□□□ 0.77
Nphp4P59240 Gm42632-201ENSMUST00000201707 2411 ntBASIC19.86■□□□□ 0.77
Nphp4P59240 Gm14451-201ENSMUST00000121581 1542 ntBASIC19.86■□□□□ 0.77
Nphp4P59240 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nphp4P59240 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nphp4P59240 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Nphp4P59240 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nphp4P59240 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nphp4P59240 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nphp4P59240 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nphp4P59240 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Gm15460-201ENSMUST00000118147 391 ntBASIC19.85■□□□□ 0.77
Nphp4P59240 Gm11424-201ENSMUST00000121929 829 ntBASIC19.85■□□□□ 0.77
Nphp4P59240 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC19.85■□□□□ 0.77
Nphp4P59240 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC19.85■□□□□ 0.77
Nphp4P59240 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Nphp4P59240 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC19.85■□□□□ 0.77
Nphp4P59240 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nphp4P59240 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC19.85■□□□□ 0.77
Nphp4P59240 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Nphp4P59240 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Nphp4P59240 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Nphp4P59240 Ldb3-207ENSMUST00000227819 1499 ntBASIC19.85■□□□□ 0.77
Nphp4P59240 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Nphp4P59240 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Nphp4P59240 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Nphp4P59240 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC19.85■□□□□ 0.77
Nphp4P59240 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Nphp4P59240 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nphp4P59240 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nphp4P59240 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nphp4P59240 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nphp4P59240 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nphp4P59240 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nphp4P59240 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.84■□□□□ 0.77
Nphp4P59240 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Nphp4P59240 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nphp4P59240 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nphp4P59240 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nphp4P59240 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nphp4P59240 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nphp4P59240 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC19.84■□□□□ 0.77
Nphp4P59240 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nphp4P59240 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC19.84■□□□□ 0.77
Nphp4P59240 AC154806.6-201ENSMUST00000228192 202 ntBASIC19.84■□□□□ 0.77
Nphp4P59240 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nphp4P59240 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nphp4P59240 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nphp4P59240 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nphp4P59240 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nphp4P59240 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nphp4P59240 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nphp4P59240 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nphp4P59240 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nphp4P59240 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms