Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.51■□□□□ 0.23
Tpm1P58771 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.51■□□□□ 0.23
Tpm1P58771 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.51■□□□□ 0.23
Tpm1P58771 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Tpm1P58771 Gm8318-201ENSMUST00000182954 872 ntBASIC16.51■□□□□ 0.23
Tpm1P58771 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Gm10252-201ENSMUST00000209541 832 ntBASIC16.51■□□□□ 0.23
Tpm1P58771 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
Tpm1P58771 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Tpm1P58771 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tpm1P58771 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Tpm1P58771 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.5■□□□□ 0.23
Tpm1P58771 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Tpm1P58771 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.5■□□□□ 0.23
Tpm1P58771 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.5■□□□□ 0.23
Tpm1P58771 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Tpm1P58771 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Tpm1P58771 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Tpm1P58771 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.5■□□□□ 0.23
Tpm1P58771 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tpm1P58771 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.49■□□□□ 0.23
Tpm1P58771 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.49■□□□□ 0.23
Tpm1P58771 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Tpm1P58771 AA414768-201ENSMUST00000121924 1257 ntBASIC16.49■□□□□ 0.23
Tpm1P58771 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.49■□□□□ 0.23
Tpm1P58771 Gm23634-201ENSMUST00000175071 91 ntBASIC16.49■□□□□ 0.23
Tpm1P58771 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Tpm1P58771 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Tpm1P58771 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Tpm1P58771 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.49■□□□□ 0.23
Tpm1P58771 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Gm8655-201ENSMUST00000221159 852 ntBASIC16.49■□□□□ 0.23
Tpm1P58771 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.49■□□□□ 0.23
Tpm1P58771 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.49■□□□□ 0.23
Tpm1P58771 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tpm1P58771 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Tpm1P58771 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Tpm1P58771 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms