Protein–RNA interactions for Protein: P57780

Actn4, Alpha-actinin-4, mousemouse

Known RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Actn4P57780 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Actn4P57780 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 Gm9103-201ENSMUST00000119371 405 ntBASIC16.09■□□□□ 0.17
Actn4P57780 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.09■□□□□ 0.17
Actn4P57780 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.09■□□□□ 0.17
Actn4P57780 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.09■□□□□ 0.17
Actn4P57780 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Actn4P57780 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Actn4P57780 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.08■□□□□ 0.17
Actn4P57780 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Actn4P57780 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Actn4P57780 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Actn4P57780 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Actn4P57780 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Actn4P57780 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Actn4P57780 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Actn4P57780 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Actn4P57780 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.08■□□□□ 0.16
Actn4P57780 Gm5970-201ENSMUST00000131638 1216 ntBASIC16.08■□□□□ 0.16
Actn4P57780 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.08■□□□□ 0.16
Actn4P57780 Gm18489-201ENSMUST00000172565 551 ntBASIC16.08■□□□□ 0.16
Actn4P57780 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.08■□□□□ 0.16
Actn4P57780 Gm37293-201ENSMUST00000191658 295 ntBASIC16.08■□□□□ 0.16
Actn4P57780 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC16.08■□□□□ 0.16
Actn4P57780 Gm9682-201ENSMUST00000197505 556 ntBASIC16.08■□□□□ 0.16
Actn4P57780 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.08■□□□□ 0.16
Actn4P57780 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Actn4P57780 AC173345.3-201ENSMUST00000221245 1093 ntBASIC16.08■□□□□ 0.16
Actn4P57780 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Actn4P57780 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Actn4P57780 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Actn4P57780 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.08■□□□□ 0.16
Actn4P57780 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Actn4P57780 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Actn4P57780 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Actn4P57780 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Actn4P57780 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Actn4P57780 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Actn4P57780 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Actn4P57780 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Actn4P57780 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.07■□□□□ 0.16
Actn4P57780 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.07■□□□□ 0.16
Actn4P57780 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Actn4P57780 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Actn4P57780 Gm12134-201ENSMUST00000122109 520 ntBASIC16.07■□□□□ 0.16
Actn4P57780 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.07■□□□□ 0.16
Actn4P57780 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Actn4P57780 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.07■□□□□ 0.16
Actn4P57780 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.07■□□□□ 0.16
Actn4P57780 Gm37153-201ENSMUST00000193637 231 ntBASIC16.07■□□□□ 0.16
Actn4P57780 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.07■□□□□ 0.16
Actn4P57780 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.07■□□□□ 0.16
Actn4P57780 CT025642.1-201ENSMUST00000224734 1219 ntBASIC16.07■□□□□ 0.16
Actn4P57780 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Actn4P57780 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.07■□□□□ 0.16
Actn4P57780 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Actn4P57780 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Actn4P57780 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Actn4P57780 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Actn4P57780 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Actn4P57780 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Actn4P57780 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Actn4P57780 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Actn4P57780 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Actn4P57780 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Actn4P57780 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Actn4P57780 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms