Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Gm15372-201ENSMUST00000120729 834 ntBASIC11.98□□□□□ -0.49
Sssca1P56873 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.98□□□□□ -0.49
Sssca1P56873 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.98□□□□□ -0.49
Sssca1P56873 Gm10499-201ENSMUST00000174094 934 ntBASIC11.98□□□□□ -0.49
Sssca1P56873 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.98□□□□□ -0.49
Sssca1P56873 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sssca1P56873 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sssca1P56873 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sssca1P56873 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sssca1P56873 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sssca1P56873 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.97□□□□□ -0.49
Sssca1P56873 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sssca1P56873 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.97□□□□□ -0.49
Sssca1P56873 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Sssca1P56873 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.97□□□□□ -0.49
Sssca1P56873 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.97□□□□□ -0.49
Sssca1P56873 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.97□□□□□ -0.49
Sssca1P56873 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.97□□□□□ -0.49
Sssca1P56873 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Sssca1P56873 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.97□□□□□ -0.49
Sssca1P56873 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sssca1P56873 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sssca1P56873 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sssca1P56873 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Sssca1P56873 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Sssca1P56873 Gm27704-201ENSMUST00000185094 107 ntBASIC11.96□□□□□ -0.49
Sssca1P56873 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.96□□□□□ -0.49
Sssca1P56873 Gm43767-201ENSMUST00000198933 381 ntBASIC11.96□□□□□ -0.49
Sssca1P56873 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sssca1P56873 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sssca1P56873 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Sssca1P56873 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Sssca1P56873 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sssca1P56873 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sssca1P56873 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sssca1P56873 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sssca1P56873 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sssca1P56873 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sssca1P56873 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sssca1P56873 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sssca1P56873 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Sssca1P56873 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.96□□□□□ -0.5
Sssca1P56873 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sssca1P56873 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms