Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.5□□□□□ -0.25
Cdh11P55288 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.5□□□□□ -0.25
Cdh11P55288 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.5□□□□□ -0.25
Cdh11P55288 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.5□□□□□ -0.25
Cdh11P55288 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.5□□□□□ -0.25
Cdh11P55288 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.5□□□□□ -0.25
Cdh11P55288 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.5□□□□□ -0.25
Cdh11P55288 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cdh11P55288 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Cdh11P55288 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdh11P55288 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.5□□□□□ -0.25
Cdh11P55288 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.5□□□□□ -0.25
Cdh11P55288 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdh11P55288 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Cdh11P55288 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh11P55288 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cdh11P55288 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.49□□□□□ -0.25
Cdh11P55288 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.49□□□□□ -0.25
Cdh11P55288 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdh11P55288 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cdh11P55288 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cdh11P55288 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cdh11P55288 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh11P55288 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.48□□□□□ -0.25
Cdh11P55288 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cdh11P55288 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Cdh11P55288 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cdh11P55288 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.48□□□□□ -0.25
Cdh11P55288 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.48□□□□□ -0.25
Cdh11P55288 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Cdh11P55288 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdh11P55288 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdh11P55288 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.48□□□□□ -0.25
Cdh11P55288 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdh11P55288 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdh11P55288 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh11P55288 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdh11P55288 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdh11P55288 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Cdh11P55288 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.47□□□□□ -0.25
Cdh11P55288 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms