Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CtskP55097 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CtskP55097 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CtskP55097 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CtskP55097 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CtskP55097 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.55□□□□□ -0.08
CtskP55097 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CtskP55097 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CtskP55097 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CtskP55097 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CtskP55097 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CtskP55097 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CtskP55097 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CtskP55097 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CtskP55097 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CtskP55097 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CtskP55097 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CtskP55097 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CtskP55097 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CtskP55097 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.54□□□□□ -0.08
CtskP55097 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CtskP55097 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.54□□□□□ -0.08
CtskP55097 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CtskP55097 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CtskP55097 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CtskP55097 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.54□□□□□ -0.08
CtskP55097 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.54□□□□□ -0.08
CtskP55097 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CtskP55097 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CtskP55097 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CtskP55097 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CtskP55097 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CtskP55097 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CtskP55097 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CtskP55097 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CtskP55097 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CtskP55097 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
CtskP55097 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.53□□□□□ -0.08
CtskP55097 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.53□□□□□ -0.08
CtskP55097 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CtskP55097 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.53□□□□□ -0.08
CtskP55097 Gm20949-201ENSMUST00000206478 952 ntBASIC14.53□□□□□ -0.08
CtskP55097 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.53□□□□□ -0.08
CtskP55097 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.53□□□□□ -0.08
CtskP55097 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CtskP55097 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CtskP55097 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.52□□□□□ -0.08
CtskP55097 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CtskP55097 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CtskP55097 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CtskP55097 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CtskP55097 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CtskP55097 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CtskP55097 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CtskP55097 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.52□□□□□ -0.08
CtskP55097 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.52□□□□□ -0.08
CtskP55097 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CtskP55097 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CtskP55097 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.52□□□□□ -0.09
CtskP55097 Gm22065-201ENSMUST00000103753 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm22066-201ENSMUST00000103761 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm24932-201ENSMUST00000103763 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm24115-201ENSMUST00000103799 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm22190-201ENSMUST00000103827 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm22191-201ENSMUST00000103831 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm24721-201ENSMUST00000103849 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm28018-201ENSMUST00000103869 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm26399-201ENSMUST00000103937 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CtskP55097 Gm11434-201ENSMUST00000122379 629 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.52□□□□□ -0.09
CtskP55097 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CtskP55097 Gm25349-201ENSMUST00000177728 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm23616-201ENSMUST00000177797 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm25871-201ENSMUST00000177816 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm24752-201ENSMUST00000178240 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm24496-201ENSMUST00000178287 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm25649-201ENSMUST00000178476 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm25548-201ENSMUST00000178681 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm23147-201ENSMUST00000178841 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm26095-201ENSMUST00000179270 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm22171-201ENSMUST00000179283 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm23936-201ENSMUST00000179354 110 ntBASIC14.52□□□□□ -0.09
CtskP55097 Gm22619-201ENSMUST00000179516 110 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms