Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nub1P54729 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Nub1P54729 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
Nub1P54729 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Nub1P54729 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.91■□□□□ 0.14
Nub1P54729 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Nub1P54729 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.91■□□□□ 0.14
Nub1P54729 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.91■□□□□ 0.14
Nub1P54729 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.91■□□□□ 0.14
Nub1P54729 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.91■□□□□ 0.14
Nub1P54729 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nub1P54729 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.9■□□□□ 0.14
Nub1P54729 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.9■□□□□ 0.14
Nub1P54729 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.9■□□□□ 0.14
Nub1P54729 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Nub1P54729 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nub1P54729 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Nub1P54729 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.89■□□□□ 0.13
Nub1P54729 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Gm25911-201ENSMUST00000157621 56 ntBASIC15.89■□□□□ 0.13
Nub1P54729 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
Nub1P54729 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.89■□□□□ 0.13
Nub1P54729 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Nub1P54729 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nub1P54729 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Nub1P54729 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Nub1P54729 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nub1P54729 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.88■□□□□ 0.13
Nub1P54729 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Nub1P54729 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nub1P54729 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Nub1P54729 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nub1P54729 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nub1P54729 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nub1P54729 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nub1P54729 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nub1P54729 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nub1P54729 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nub1P54729 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nub1P54729 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Nub1P54729 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Nub1P54729 Gm11594-201ENSMUST00000122313 162 ntBASIC15.88■□□□□ 0.13
Nub1P54729 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Nub1P54729 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nub1P54729 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Nub1P54729 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nub1P54729 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms