Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GdnfP48540 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GdnfP48540 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
GdnfP48540 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GdnfP48540 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GdnfP48540 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GdnfP48540 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GdnfP48540 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GdnfP48540 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GdnfP48540 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GdnfP48540 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
GdnfP48540 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GdnfP48540 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GdnfP48540 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.98□□□□□ -0.33
GdnfP48540 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
GdnfP48540 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
GdnfP48540 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
GdnfP48540 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
GdnfP48540 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
GdnfP48540 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.98□□□□□ -0.33
GdnfP48540 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.98□□□□□ -0.33
GdnfP48540 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.98□□□□□ -0.33
GdnfP48540 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
GdnfP48540 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
GdnfP48540 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
GdnfP48540 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
GdnfP48540 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.98□□□□□ -0.33
GdnfP48540 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
GdnfP48540 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
GdnfP48540 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GdnfP48540 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.97□□□□□ -0.33
GdnfP48540 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.97□□□□□ -0.33
GdnfP48540 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
GdnfP48540 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
GdnfP48540 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GdnfP48540 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GdnfP48540 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
GdnfP48540 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GdnfP48540 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
GdnfP48540 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
GdnfP48540 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
GdnfP48540 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GdnfP48540 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GdnfP48540 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GdnfP48540 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
GdnfP48540 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms