Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Dupd1-202ENSMUST00000224735 548 ntBASIC12.8□□□□□ -0.36
TgfaP48030 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TgfaP48030 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TgfaP48030 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TgfaP48030 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TgfaP48030 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TgfaP48030 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.8□□□□□ -0.36
TgfaP48030 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TgfaP48030 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TgfaP48030 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TgfaP48030 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TgfaP48030 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
TgfaP48030 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TgfaP48030 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TgfaP48030 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TgfaP48030 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
TgfaP48030 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TgfaP48030 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TgfaP48030 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TgfaP48030 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
TgfaP48030 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TgfaP48030 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TgfaP48030 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.79□□□□□ -0.36
TgfaP48030 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TgfaP48030 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TgfaP48030 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.79□□□□□ -0.36
TgfaP48030 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.79□□□□□ -0.36
TgfaP48030 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TgfaP48030 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Gm29310-201ENSMUST00000185468 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm21825-201ENSMUST00000185728 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm29109-201ENSMUST00000185895 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm21896-201ENSMUST00000186520 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
TgfaP48030 Gm21873-201ENSMUST00000186728 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm21794-201ENSMUST00000187056 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm21880-201ENSMUST00000187275 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm21826-201ENSMUST00000187451 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm21198-201ENSMUST00000188393 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm21749-201ENSMUST00000189343 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm21901-201ENSMUST00000189568 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm29424-201ENSMUST00000189716 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm28599-201ENSMUST00000189838 694 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm21867-201ENSMUST00000189917 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm29269-201ENSMUST00000190087 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm21722-201ENSMUST00000190153 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm28423-201ENSMUST00000190701 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm21899-201ENSMUST00000190745 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm21910-201ENSMUST00000191163 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm21849-201ENSMUST00000191571 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm28678-201ENSMUST00000191593 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm20910-201ENSMUST00000193268 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Gm21871-201ENSMUST00000194621 696 ntBASIC12.79□□□□□ -0.36
TgfaP48030 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.79□□□□□ -0.36
TgfaP48030 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.79□□□□□ -0.36
TgfaP48030 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TgfaP48030 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TgfaP48030 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TgfaP48030 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
TgfaP48030 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TgfaP48030 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TgfaP48030 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TgfaP48030 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TgfaP48030 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TgfaP48030 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TgfaP48030 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TgfaP48030 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TgfaP48030 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TgfaP48030 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TgfaP48030 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.78□□□□□ -0.36
TgfaP48030 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TgfaP48030 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TgfaP48030 Gm45668-201ENSMUST00000211271 493 ntBASIC12.78□□□□□ -0.36
TgfaP48030 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.78□□□□□ -0.36
TgfaP48030 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TgfaP48030 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TgfaP48030 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms