Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Sox18P43680 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sox18P43680 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sox18P43680 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox18P43680 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.17□□□□□ -0.14
Sox18P43680 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Sox18P43680 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sox18P43680 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sox18P43680 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sox18P43680 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Sox18P43680 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sox18P43680 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Gm22189-201ENSMUST00000103822 86 ntBASIC14.17□□□□□ -0.14
Sox18P43680 Gm24543-201ENSMUST00000103867 82 ntBASIC14.17□□□□□ -0.14
Sox18P43680 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sox18P43680 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.17□□□□□ -0.14
Sox18P43680 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Sox18P43680 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox18P43680 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.17□□□□□ -0.14
Sox18P43680 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
Sox18P43680 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Sox18P43680 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.17□□□□□ -0.14
Sox18P43680 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.17□□□□□ -0.14
Sox18P43680 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sox18P43680 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sox18P43680 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.17□□□□□ -0.14
Sox18P43680 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox18P43680 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox18P43680 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox18P43680 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sox18P43680 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox18P43680 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sox18P43680 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox18P43680 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.16□□□□□ -0.14
Sox18P43680 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox18P43680 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox18P43680 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox18P43680 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox18P43680 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sox18P43680 Gm14722-201ENSMUST00000118943 689 ntBASIC14.16□□□□□ -0.14
Sox18P43680 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.16□□□□□ -0.14
Sox18P43680 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sox18P43680 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox18P43680 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox18P43680 Gm36991-201ENSMUST00000191800 648 ntBASIC14.16□□□□□ -0.14
Sox18P43680 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.16□□□□□ -0.14
Sox18P43680 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.16□□□□□ -0.14
Sox18P43680 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox18P43680 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox18P43680 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox18P43680 Gm20445-201ENSMUST00000061905 565 ntBASIC14.16□□□□□ -0.14
Sox18P43680 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sox18P43680 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox18P43680 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox18P43680 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox18P43680 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sox18P43680 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox18P43680 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.16□□□□□ -0.14
Sox18P43680 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sox18P43680 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox18P43680 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.15□□□□□ -0.14
Sox18P43680 Gm9519-201ENSMUST00000206108 1337 ntBASIC14.15□□□□□ -0.14
Sox18P43680 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.15□□□□□ -0.14
Sox18P43680 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.15□□□□□ -0.14
Sox18P43680 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox18P43680 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox18P43680 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox18P43680 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox18P43680 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox18P43680 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox18P43680 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.15□□□□□ -0.14
Sox18P43680 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox18P43680 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox18P43680 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms