Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tnfsf4P43488 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.29□□□□□ -0.12
Tnfsf4P43488 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.29□□□□□ -0.12
Tnfsf4P43488 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Gm28033-201ENSMUST00000184224 96 ntBASIC14.29□□□□□ -0.12
Tnfsf4P43488 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tnfsf4P43488 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Gm7222-201ENSMUST00000117512 906 ntBASIC14.28□□□□□ -0.12
Tnfsf4P43488 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.28□□□□□ -0.12
Tnfsf4P43488 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Gm7787-201ENSMUST00000216858 688 ntBASIC14.28□□□□□ -0.12
Tnfsf4P43488 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfsf4P43488 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfsf4P43488 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.27□□□□□ -0.12
Tnfsf4P43488 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Tnfsf4P43488 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.27□□□□□ -0.12
Tnfsf4P43488 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfsf4P43488 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfsf4P43488 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfsf4P43488 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfsf4P43488 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfsf4P43488 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.27□□□□□ -0.13
Tnfsf4P43488 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.27□□□□□ -0.13
Tnfsf4P43488 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.27□□□□□ -0.13
Tnfsf4P43488 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfsf4P43488 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.27□□□□□ -0.13
Tnfsf4P43488 Gm43347-201ENSMUST00000200226 580 ntBASIC14.27□□□□□ -0.13
Tnfsf4P43488 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.27□□□□□ -0.13
Tnfsf4P43488 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfsf4P43488 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.27□□□□□ -0.13
Tnfsf4P43488 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.27□□□□□ -0.13
Tnfsf4P43488 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.27□□□□□ -0.13
Tnfsf4P43488 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfsf4P43488 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfsf4P43488 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Tnfsf4P43488 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfsf4P43488 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfsf4P43488 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfsf4P43488 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms