Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.26■□□□□ 0.03
Msh2P43247 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Msh2P43247 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh2P43247 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.26■□□□□ 0.03
Msh2P43247 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh2P43247 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh2P43247 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Msh2P43247 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh2P43247 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh2P43247 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh2P43247 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh2P43247 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh2P43247 Grk6-207ENSMUST00000225925 2769 ntBASIC15.26■□□□□ 0.03
Msh2P43247 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh2P43247 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh2P43247 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh2P43247 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Msh2P43247 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.26■□□□□ 0.03
Msh2P43247 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.26■□□□□ 0.03
Msh2P43247 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Msh2P43247 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Msh2P43247 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Msh2P43247 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.25■□□□□ 0.03
Msh2P43247 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.25■□□□□ 0.03
Msh2P43247 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.25■□□□□ 0.03
Msh2P43247 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.25■□□□□ 0.03
Msh2P43247 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.25■□□□□ 0.03
Msh2P43247 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.25■□□□□ 0.03
Msh2P43247 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Msh2P43247 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Msh2P43247 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.25■□□□□ 0.03
Msh2P43247 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Msh2P43247 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.24■□□□□ 0.03
Msh2P43247 Gm2651-201ENSMUST00000203560 838 ntBASIC15.24■□□□□ 0.03
Msh2P43247 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.24■□□□□ 0.03
Msh2P43247 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Msh2P43247 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Msh2P43247 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.24■□□□□ 0.03
Msh2P43247 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.24■□□□□ 0.03
Msh2P43247 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.24■□□□□ 0.03
Msh2P43247 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Msh2P43247 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Msh2P43247 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh2P43247 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh2P43247 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Msh2P43247 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh2P43247 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Msh2P43247 Gm18733-201ENSMUST00000173950 856 ntBASIC15.23■□□□□ 0.03
Msh2P43247 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Msh2P43247 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.23■□□□□ 0.03
Msh2P43247 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
Msh2P43247 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh2P43247 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh2P43247 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh2P43247 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Msh2P43247 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh2P43247 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh2P43247 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Msh2P43247 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Msh2P43247 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms