Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.34□□□□□ -0.11
TfamP40630 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.34□□□□□ -0.11
TfamP40630 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.34□□□□□ -0.11
TfamP40630 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.34□□□□□ -0.11
TfamP40630 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.34□□□□□ -0.11
TfamP40630 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TfamP40630 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TfamP40630 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TfamP40630 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TfamP40630 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TfamP40630 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TfamP40630 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TfamP40630 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TfamP40630 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TfamP40630 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TfamP40630 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TfamP40630 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TfamP40630 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
TfamP40630 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TfamP40630 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TfamP40630 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TfamP40630 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TfamP40630 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TfamP40630 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TfamP40630 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TfamP40630 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TfamP40630 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TfamP40630 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TfamP40630 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TfamP40630 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.33□□□□□ -0.12
TfamP40630 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.33□□□□□ -0.12
TfamP40630 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TfamP40630 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TfamP40630 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TfamP40630 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.32□□□□□ -0.12
TfamP40630 Gm11452-201ENSMUST00000122376 690 ntBASIC14.32□□□□□ -0.12
TfamP40630 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 Gm17971-201ENSMUST00000190239 806 ntBASIC14.32□□□□□ -0.12
TfamP40630 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TfamP40630 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.32□□□□□ -0.12
TfamP40630 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.32□□□□□ -0.12
TfamP40630 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TfamP40630 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.32□□□□□ -0.12
TfamP40630 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TfamP40630 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.32□□□□□ -0.12
TfamP40630 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TfamP40630 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TfamP40630 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TfamP40630 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TfamP40630 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TfamP40630 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TfamP40630 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TfamP40630 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TfamP40630 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TfamP40630 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.31□□□□□ -0.12
TfamP40630 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.31□□□□□ -0.12
TfamP40630 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.31□□□□□ -0.12
TfamP40630 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TfamP40630 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TfamP40630 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TfamP40630 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.31□□□□□ -0.12
TfamP40630 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TfamP40630 Gm10819-201ENSMUST00000099988 561 ntBASIC14.31□□□□□ -0.12
TfamP40630 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TfamP40630 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TfamP40630 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TfamP40630 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TfamP40630 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TfamP40630 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TfamP40630 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TfamP40630 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TfamP40630 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms