Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Upk2P38575 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.97□□□□□ -0.33
Upk2P38575 Gm13464-201ENSMUST00000119418 935 ntBASIC12.97□□□□□ -0.33
Upk2P38575 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.97□□□□□ -0.33
Upk2P38575 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.97□□□□□ -0.33
Upk2P38575 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.97□□□□□ -0.33
Upk2P38575 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Upk2P38575 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Upk2P38575 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Upk2P38575 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk2P38575 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Upk2P38575 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Upk2P38575 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Upk2P38575 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Upk2P38575 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Upk2P38575 Gm9726-201ENSMUST00000180321 678 ntBASIC12.96□□□□□ -0.33
Upk2P38575 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.96□□□□□ -0.33
Upk2P38575 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.96□□□□□ -0.33
Upk2P38575 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk2P38575 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Upk2P38575 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Upk2P38575 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk2P38575 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk2P38575 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk2P38575 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Upk2P38575 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk2P38575 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk2P38575 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk2P38575 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk2P38575 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.96□□□□□ -0.34
Upk2P38575 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk2P38575 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk2P38575 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk2P38575 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk2P38575 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.96□□□□□ -0.34
Upk2P38575 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk2P38575 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.95□□□□□ -0.34
Upk2P38575 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.95□□□□□ -0.34
Upk2P38575 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Upk2P38575 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.95□□□□□ -0.34
Upk2P38575 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Upk2P38575 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.95□□□□□ -0.34
Upk2P38575 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.95□□□□□ -0.34
Upk2P38575 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.95□□□□□ -0.34
Upk2P38575 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk2P38575 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms