Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.56□□□□□ -0.08
HmgclP38060 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HmgclP38060 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HmgclP38060 Gm17271-201ENSMUST00000165535 355 ntBASIC14.56□□□□□ -0.08
HmgclP38060 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.56□□□□□ -0.08
HmgclP38060 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.56□□□□□ -0.08
HmgclP38060 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HmgclP38060 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.56□□□□□ -0.08
HmgclP38060 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HmgclP38060 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HmgclP38060 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HmgclP38060 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HmgclP38060 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HmgclP38060 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HmgclP38060 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
HmgclP38060 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HmgclP38060 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HmgclP38060 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HmgclP38060 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HmgclP38060 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HmgclP38060 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HmgclP38060 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.56□□□□□ -0.08
HmgclP38060 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HmgclP38060 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HmgclP38060 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HmgclP38060 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HmgclP38060 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HmgclP38060 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.55□□□□□ -0.08
HmgclP38060 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HmgclP38060 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HmgclP38060 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.55□□□□□ -0.08
HmgclP38060 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HmgclP38060 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.55□□□□□ -0.08
HmgclP38060 Gm2451-201ENSMUST00000199447 999 ntBASIC14.55□□□□□ -0.08
HmgclP38060 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.55□□□□□ -0.08
HmgclP38060 Gm10290-201ENSMUST00000200451 999 ntBASIC14.55□□□□□ -0.08
HmgclP38060 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.55□□□□□ -0.08
HmgclP38060 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HmgclP38060 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HmgclP38060 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HmgclP38060 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HmgclP38060 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HmgclP38060 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HmgclP38060 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HmgclP38060 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HmgclP38060 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HmgclP38060 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HmgclP38060 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HmgclP38060 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HmgclP38060 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
HmgclP38060 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.54□□□□□ -0.08
HmgclP38060 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
HmgclP38060 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
HmgclP38060 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.54□□□□□ -0.08
HmgclP38060 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.54□□□□□ -0.08
HmgclP38060 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.54□□□□□ -0.08
HmgclP38060 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.54□□□□□ -0.08
HmgclP38060 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.54□□□□□ -0.08
HmgclP38060 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Gm20553-201ENSMUST00000204205 844 ntBASIC14.54□□□□□ -0.08
HmgclP38060 Olfr286-202ENSMUST00000205305 969 ntBASIC14.54□□□□□ -0.08
HmgclP38060 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.54□□□□□ -0.08
HmgclP38060 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
HmgclP38060 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HmgclP38060 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.54□□□□□ -0.08
HmgclP38060 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HmgclP38060 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HmgclP38060 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HmgclP38060 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HmgclP38060 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HmgclP38060 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HmgclP38060 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.53□□□□□ -0.08
HmgclP38060 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HmgclP38060 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HmgclP38060 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms