Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Gm27702-201ENSMUST00000184512 56 ntBASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Gm2756-201ENSMUST00000195851 400 ntBASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tnfrsf1bP25119 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Gm6736-201ENSMUST00000166583 948 ntBASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Gm20553-201ENSMUST00000204205 844 ntBASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tnfrsf1bP25119 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Efs-202ENSMUST00000227037 2540 ntBASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tnfrsf1bP25119 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfrsf1bP25119 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
Tnfrsf1bP25119 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms