Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6bP23440 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6bP23440 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6bP23440 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pde6bP23440 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6bP23440 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.16■□□□□ 0.18
Pde6bP23440 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.16■□□□□ 0.18
Pde6bP23440 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.16■□□□□ 0.18
Pde6bP23440 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.16■□□□□ 0.18
Pde6bP23440 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6bP23440 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.16■□□□□ 0.18
Pde6bP23440 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6bP23440 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.16■□□□□ 0.18
Pde6bP23440 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6bP23440 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6bP23440 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6bP23440 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pde6bP23440 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6bP23440 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.16■□□□□ 0.18
Pde6bP23440 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6bP23440 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6bP23440 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6bP23440 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pde6bP23440 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pde6bP23440 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6bP23440 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6bP23440 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6bP23440 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.15■□□□□ 0.18
Pde6bP23440 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.15■□□□□ 0.18
Pde6bP23440 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6bP23440 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6bP23440 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6bP23440 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6bP23440 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.15■□□□□ 0.18
Pde6bP23440 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6bP23440 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6bP23440 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Pde6bP23440 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Pde6bP23440 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6bP23440 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6bP23440 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6bP23440 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pde6bP23440 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.14■□□□□ 0.17
Pde6bP23440 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Pde6bP23440 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pde6bP23440 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Pde6bP23440 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Gm9824-201ENSMUST00000178707 561 ntBASIC16.14■□□□□ 0.17
Pde6bP23440 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.14■□□□□ 0.17
Pde6bP23440 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.14■□□□□ 0.17
Pde6bP23440 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pde6bP23440 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pde6bP23440 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pde6bP23440 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pde6bP23440 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Pde6bP23440 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pde6bP23440 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.13■□□□□ 0.17
Pde6bP23440 Gm15693-201ENSMUST00000120470 637 ntBASIC16.13■□□□□ 0.17
Pde6bP23440 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.13■□□□□ 0.17
Pde6bP23440 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.13■□□□□ 0.17
Pde6bP23440 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pde6bP23440 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Pde6bP23440 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Pde6bP23440 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pde6bP23440 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pde6bP23440 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms