Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.81□□□□□ -0.2
Clk1P22518 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.81□□□□□ -0.2
Clk1P22518 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.81□□□□□ -0.2
Clk1P22518 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.81□□□□□ -0.2
Clk1P22518 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clk1P22518 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Clk1P22518 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.8□□□□□ -0.2
Clk1P22518 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.8□□□□□ -0.2
Clk1P22518 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.8□□□□□ -0.2
Clk1P22518 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clk1P22518 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.8□□□□□ -0.2
Clk1P22518 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.8□□□□□ -0.2
Clk1P22518 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.8□□□□□ -0.2
Clk1P22518 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.8□□□□□ -0.2
Clk1P22518 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Mzt1-203ENSMUST00000227948 952 ntBASIC13.8□□□□□ -0.2
Clk1P22518 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Clk1P22518 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.8□□□□□ -0.2
Clk1P22518 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clk1P22518 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.8□□□□□ -0.2
Clk1P22518 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clk1P22518 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.79□□□□□ -0.2
Clk1P22518 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.79□□□□□ -0.2
Clk1P22518 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.79□□□□□ -0.2
Clk1P22518 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Clk1P22518 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.79□□□□□ -0.2
Clk1P22518 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Clk1P22518 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Clk1P22518 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.79□□□□□ -0.2
Clk1P22518 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.79□□□□□ -0.2
Clk1P22518 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Clk1P22518 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Clk1P22518 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Clk1P22518 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.79□□□□□ -0.2
Clk1P22518 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clk1P22518 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Clk1P22518 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clk1P22518 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Gm12350-201ENSMUST00000121208 462 ntBASIC13.78□□□□□ -0.2
Clk1P22518 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.78□□□□□ -0.2
Clk1P22518 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clk1P22518 Gm2651-201ENSMUST00000203560 838 ntBASIC13.78□□□□□ -0.2
Clk1P22518 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.78□□□□□ -0.2
Clk1P22518 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.78□□□□□ -0.2
Clk1P22518 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clk1P22518 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clk1P22518 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms