Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp53P15975 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp53P15975 Gm9824-201ENSMUST00000178707 561 ntBASIC17.1■□□□□ 0.33
Usp53P15975 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.1■□□□□ 0.33
Usp53P15975 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.1■□□□□ 0.33
Usp53P15975 Gm2451-201ENSMUST00000199447 999 ntBASIC17.1■□□□□ 0.33
Usp53P15975 Gm10290-201ENSMUST00000200451 999 ntBASIC17.1■□□□□ 0.33
Usp53P15975 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.1■□□□□ 0.33
Usp53P15975 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp53P15975 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.1■□□□□ 0.33
Usp53P15975 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Usp53P15975 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp53P15975 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp53P15975 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Usp53P15975 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.1■□□□□ 0.33
Usp53P15975 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Usp53P15975 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp53P15975 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.09■□□□□ 0.33
Usp53P15975 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Usp53P15975 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Usp53P15975 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.09■□□□□ 0.33
Usp53P15975 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.09■□□□□ 0.33
Usp53P15975 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Usp53P15975 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp53P15975 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp53P15975 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Usp53P15975 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Usp53P15975 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.08■□□□□ 0.33
Usp53P15975 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Usp53P15975 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp53P15975 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp53P15975 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp53P15975 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Usp53P15975 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.08■□□□□ 0.32
Usp53P15975 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.08■□□□□ 0.32
Usp53P15975 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp53P15975 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp53P15975 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp53P15975 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp53P15975 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp53P15975 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp53P15975 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp53P15975 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp53P15975 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp53P15975 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp53P15975 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp53P15975 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp53P15975 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.08■□□□□ 0.32
Usp53P15975 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp53P15975 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Usp53P15975 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp53P15975 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp53P15975 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp53P15975 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp53P15975 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp53P15975 Gm8749-201ENSMUST00000117737 331 ntBASIC17.07■□□□□ 0.32
Usp53P15975 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Usp53P15975 Gm27618-201ENSMUST00000183671 60 ntBASIC17.07■□□□□ 0.32
Usp53P15975 Gm27430-201ENSMUST00000184585 107 ntBASIC17.07■□□□□ 0.32
Usp53P15975 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Usp53P15975 Gm18766-201ENSMUST00000189811 808 ntBASIC17.07■□□□□ 0.32
Usp53P15975 Gm44333-201ENSMUST00000197168 107 ntBASIC17.07■□□□□ 0.32
Usp53P15975 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Usp53P15975 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp53P15975 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.07■□□□□ 0.32
Usp53P15975 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp53P15975 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp53P15975 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp53P15975 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp53P15975 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.07■□□□□ 0.32
Usp53P15975 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms