Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.5□□□□□ -0.57
Ccl1P10146 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ccl1P10146 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccl1P10146 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccl1P10146 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccl1P10146 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccl1P10146 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.49□□□□□ -0.57
Ccl1P10146 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Ccl1P10146 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Ccl1P10146 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ccl1P10146 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccl1P10146 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccl1P10146 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.49□□□□□ -0.57
Ccl1P10146 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccl1P10146 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ccl1P10146 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ccl1P10146 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.48□□□□□ -0.57
Ccl1P10146 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccl1P10146 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Gm10653-202ENSMUST00000139570 835 ntBASIC11.48□□□□□ -0.57
Ccl1P10146 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.48□□□□□ -0.57
Ccl1P10146 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccl1P10146 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccl1P10146 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ccl1P10146 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Celf4-206ENSMUST00000224553 1729 ntBASIC11.48□□□□□ -0.57
Ccl1P10146 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ccl1P10146 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ccl1P10146 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
Ccl1P10146 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.48□□□□□ -0.57
Ccl1P10146 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccl1P10146 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ccl1P10146 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccl1P10146 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.47□□□□□ -0.57
Ccl1P10146 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ccl1P10146 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccl1P10146 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.47□□□□□ -0.57
Ccl1P10146 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ccl1P10146 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccl1P10146 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccl1P10146 Gm25406-201ENSMUST00000157599 105 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms