Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp6P0C0A3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Chmp6P0C0A3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp6P0C0A3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Chmp6P0C0A3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Gm17271-201ENSMUST00000165535 355 ntBASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Gm2213-201ENSMUST00000197485 688 ntBASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp6P0C0A3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp6P0C0A3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp6P0C0A3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp6P0C0A3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp6P0C0A3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp6P0C0A3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp6P0C0A3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms