Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a1P02463 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a1P02463 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a1P02463 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Col4a1P02463 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Col4a1P02463 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.92■□□□□ 0.46
Col4a1P02463 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a1P02463 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a1P02463 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a1P02463 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a1P02463 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a1P02463 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col4a1P02463 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Col4a1P02463 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a1P02463 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a1P02463 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a1P02463 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.91■□□□□ 0.46
Col4a1P02463 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a1P02463 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a1P02463 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a1P02463 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a1P02463 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a1P02463 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a1P02463 Gm5303-201ENSMUST00000117943 1252 ntBASIC17.91■□□□□ 0.46
Col4a1P02463 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.91■□□□□ 0.46
Col4a1P02463 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a1P02463 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC17.91■□□□□ 0.46
Col4a1P02463 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.91■□□□□ 0.46
Col4a1P02463 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.91■□□□□ 0.46
Col4a1P02463 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a1P02463 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a1P02463 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a1P02463 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.91■□□□□ 0.46
Col4a1P02463 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Col4a1P02463 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a1P02463 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Col4a1P02463 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col4a1P02463 Gm11918-201ENSMUST00000121660 179 ntBASIC17.9■□□□□ 0.46
Col4a1P02463 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.9■□□□□ 0.46
Col4a1P02463 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a1P02463 Mir6392-201ENSMUST00000184924 108 ntBASIC17.9■□□□□ 0.46
Col4a1P02463 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.9■□□□□ 0.46
Col4a1P02463 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a1P02463 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.9■□□□□ 0.46
Col4a1P02463 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.9■□□□□ 0.46
Col4a1P02463 AC125350.2-201ENSMUST00000224737 727 ntBASIC17.9■□□□□ 0.46
Col4a1P02463 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a1P02463 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a1P02463 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a1P02463 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a1P02463 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a1P02463 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a1P02463 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.9■□□□□ 0.46
Col4a1P02463 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a1P02463 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a1P02463 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a1P02463 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.9■□□□□ 0.46
Col4a1P02463 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a1P02463 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a1P02463 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.9■□□□□ 0.46
Col4a1P02463 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a1P02463 Gm12585-201ENSMUST00000117307 290 ntBASIC17.9■□□□□ 0.46
Col4a1P02463 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Col4a1P02463 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.9■□□□□ 0.46
Col4a1P02463 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.9■□□□□ 0.46
Col4a1P02463 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a1P02463 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC17.9■□□□□ 0.46
Col4a1P02463 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.9■□□□□ 0.46
Col4a1P02463 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col4a1P02463 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Col4a1P02463 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Col4a1P02463 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
Col4a1P02463 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Col4a1P02463 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.89■□□□□ 0.46
Col4a1P02463 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.89■□□□□ 0.45
Col4a1P02463 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Col4a1P02463 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Col4a1P02463 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Col4a1P02463 Gm15393-201ENSMUST00000120499 219 ntBASIC17.89■□□□□ 0.45
Col4a1P02463 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Col4a1P02463 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Col4a1P02463 Gm7558-201ENSMUST00000193221 1165 ntBASIC17.89■□□□□ 0.45
Col4a1P02463 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC17.89■□□□□ 0.45
Col4a1P02463 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col4a1P02463 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms