Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
P01852 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.54□□□□□ -0.24
P01852 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.54□□□□□ -0.24
P01852 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.54□□□□□ -0.24
P01852 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
P01852 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
P01852 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.53□□□□□ -0.24
P01852 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.53□□□□□ -0.24
P01852 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
P01852 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.53□□□□□ -0.24
P01852 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
P01852 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
P01852 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P01852 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
P01852 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.52□□□□□ -0.24
P01852 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.52□□□□□ -0.24
P01852 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
P01852 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
P01852 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P01852 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P01852 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
P01852 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P01852 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
P01852 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.52□□□□□ -0.25
P01852 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.52□□□□□ -0.25
P01852 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.52□□□□□ -0.25
P01852 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.52□□□□□ -0.25
P01852 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.52□□□□□ -0.25
P01852 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.52□□□□□ -0.25
P01852 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
P01852 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
P01852 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
P01852 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
P01852 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 Gm6736-201ENSMUST00000166583 948 ntBASIC13.51□□□□□ -0.25
P01852 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
P01852 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 Gm27702-201ENSMUST00000184512 56 ntBASIC13.51□□□□□ -0.25
P01852 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.51□□□□□ -0.25
P01852 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.51□□□□□ -0.25
P01852 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
P01852 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
P01852 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.51□□□□□ -0.25
P01852 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
P01852 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P01852 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms