Protein–RNA interactions for Protein: O88951

Lin7b, Protein lin-7 homolog B, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin7bO88951 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lin7bO88951 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lin7bO88951 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.04□□□□□ -0.32
Lin7bO88951 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.04□□□□□ -0.32
Lin7bO88951 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Lin7bO88951 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.04□□□□□ -0.32
Lin7bO88951 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Lin7bO88951 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Rprl3-201ENSMUST00000157400 290 ntBASIC13.04□□□□□ -0.32
Lin7bO88951 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lin7bO88951 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Gm17807-201ENSMUST00000186869 298 ntBASIC13.04□□□□□ -0.32
Lin7bO88951 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.04□□□□□ -0.32
Lin7bO88951 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.04□□□□□ -0.32
Lin7bO88951 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Lin7bO88951 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lin7bO88951 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lin7bO88951 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Lin7bO88951 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lin7bO88951 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lin7bO88951 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.03□□□□□ -0.32
Lin7bO88951 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lin7bO88951 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Gm15794-201ENSMUST00000120182 631 ntBASIC13.03□□□□□ -0.32
Lin7bO88951 Gm27357-201ENSMUST00000183754 135 ntBASIC13.03□□□□□ -0.32
Lin7bO88951 Ank2-226ENSMUST00000189368 339 ntBASIC13.03□□□□□ -0.32
Lin7bO88951 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.03□□□□□ -0.32
Lin7bO88951 Gm18622-201ENSMUST00000219361 595 ntBASIC13.03□□□□□ -0.32
Lin7bO88951 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.03□□□□□ -0.32
Lin7bO88951 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.03□□□□□ -0.32
Lin7bO88951 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.03□□□□□ -0.32
Lin7bO88951 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lin7bO88951 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.03□□□□□ -0.32
Lin7bO88951 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lin7bO88951 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.03□□□□□ -0.32
Lin7bO88951 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lin7bO88951 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lin7bO88951 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lin7bO88951 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Lin7bO88951 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lin7bO88951 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.02□□□□□ -0.32
Lin7bO88951 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lin7bO88951 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lin7bO88951 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lin7bO88951 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lin7bO88951 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lin7bO88951 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Lin7bO88951 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lin7bO88951 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lin7bO88951 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lin7bO88951 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lin7bO88951 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms