Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hdac3O88895 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hdac3O88895 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hdac3O88895 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hdac3O88895 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hdac3O88895 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hdac3O88895 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Hdac3O88895 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hdac3O88895 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hdac3O88895 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hdac3O88895 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hdac3O88895 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Hdac3O88895 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.27□□□□□ -0.29
Hdac3O88895 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.26□□□□□ -0.29
Hdac3O88895 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.26□□□□□ -0.29
Hdac3O88895 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.26□□□□□ -0.29
Hdac3O88895 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.26□□□□□ -0.29
Hdac3O88895 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Hdac3O88895 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.26□□□□□ -0.29
Hdac3O88895 Gm37153-201ENSMUST00000193637 231 ntBASIC13.26□□□□□ -0.29
Hdac3O88895 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Hdac3O88895 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
Hdac3O88895 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.26□□□□□ -0.29
Hdac3O88895 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hdac3O88895 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hdac3O88895 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.25□□□□□ -0.29
Hdac3O88895 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Hdac3O88895 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.25□□□□□ -0.29
Hdac3O88895 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.25□□□□□ -0.29
Hdac3O88895 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.25□□□□□ -0.29
Hdac3O88895 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.25□□□□□ -0.29
Hdac3O88895 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.25□□□□□ -0.29
Hdac3O88895 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.25□□□□□ -0.29
Hdac3O88895 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Hdac3O88895 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hdac3O88895 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.25□□□□□ -0.29
Hdac3O88895 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Hdac3O88895 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.24□□□□□ -0.29
Hdac3O88895 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Hdac3O88895 Gm11452-201ENSMUST00000122376 690 ntBASIC13.24□□□□□ -0.29
Hdac3O88895 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Hdac3O88895 Gm6550-201ENSMUST00000187574 993 ntBASIC13.24□□□□□ -0.29
Hdac3O88895 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.24□□□□□ -0.29
Hdac3O88895 AV026068-213ENSMUST00000223675 1171 ntBASIC13.24□□□□□ -0.29
Hdac3O88895 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hdac3O88895 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.24□□□□□ -0.29
Hdac3O88895 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms