Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC19.22■□□□□ 0.67
Apaf1O88879 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Apaf1O88879 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Apaf1O88879 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Apaf1O88879 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Apaf1O88879 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Apaf1O88879 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Apaf1O88879 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Apaf1O88879 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Apaf1O88879 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Apaf1O88879 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Apaf1O88879 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Apaf1O88879 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Apaf1O88879 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Apaf1O88879 Mir449b-201ENSMUST00000104833 80 ntBASIC19.21■□□□□ 0.67
Apaf1O88879 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Apaf1O88879 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Apaf1O88879 Gm25948-201ENSMUST00000175334 112 ntBASIC19.21■□□□□ 0.67
Apaf1O88879 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Apaf1O88879 Gm5779-201ENSMUST00000218467 910 ntBASIC19.21■□□□□ 0.67
Apaf1O88879 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Apaf1O88879 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Apaf1O88879 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Apaf1O88879 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Apaf1O88879 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.2■□□□□ 0.66
Apaf1O88879 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Gm25287-201ENSMUST00000103846 110 ntBASIC19.2■□□□□ 0.66
Apaf1O88879 Gm22918-201ENSMUST00000103855 110 ntBASIC19.2■□□□□ 0.66
Apaf1O88879 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC19.2■□□□□ 0.66
Apaf1O88879 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.2■□□□□ 0.66
Apaf1O88879 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Apaf1O88879 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Apaf1O88879 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC19.2■□□□□ 0.66
Apaf1O88879 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC19.2■□□□□ 0.66
Apaf1O88879 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Apaf1O88879 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Apaf1O88879 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Apaf1O88879 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Apaf1O88879 Gm13616-201ENSMUST00000120600 222 ntBASIC19.19■□□□□ 0.66
Apaf1O88879 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Gm9726-201ENSMUST00000180321 678 ntBASIC19.19■□□□□ 0.66
Apaf1O88879 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.19■□□□□ 0.66
Apaf1O88879 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.19■□□□□ 0.66
Apaf1O88879 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.19■□□□□ 0.66
Apaf1O88879 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC19.19■□□□□ 0.66
Apaf1O88879 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Olfr286-202ENSMUST00000205305 969 ntBASIC19.19■□□□□ 0.66
Apaf1O88879 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.19■□□□□ 0.66
Apaf1O88879 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC19.19■□□□□ 0.66
Apaf1O88879 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Apaf1O88879 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Apaf1O88879 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.19■□□□□ 0.66
Apaf1O88879 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
Apaf1O88879 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.18■□□□□ 0.66
Apaf1O88879 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms