Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.7□□□□□ -0.38
Cldn1O88551 Gm9794-201ENSMUST00000202370 423 ntBASIC12.7□□□□□ -0.38
Cldn1O88551 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.7□□□□□ -0.38
Cldn1O88551 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cldn1O88551 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Cldn1O88551 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cldn1O88551 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.7□□□□□ -0.38
Cldn1O88551 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Cldn1O88551 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Cldn1O88551 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cldn1O88551 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.69□□□□□ -0.38
Cldn1O88551 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.69□□□□□ -0.38
Cldn1O88551 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Cldn1O88551 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.69□□□□□ -0.38
Cldn1O88551 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.69□□□□□ -0.38
Cldn1O88551 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Cldn1O88551 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Cldn1O88551 Gm2810-201ENSMUST00000118681 990 ntBASIC12.69□□□□□ -0.38
Cldn1O88551 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.69□□□□□ -0.38
Cldn1O88551 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Cldn1O88551 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cldn1O88551 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.69□□□□□ -0.38
Cldn1O88551 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.69□□□□□ -0.38
Cldn1O88551 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.69□□□□□ -0.38
Cldn1O88551 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.69□□□□□ -0.38
Cldn1O88551 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.69□□□□□ -0.38
Cldn1O88551 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Cldn1O88551 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.69□□□□□ -0.38
Cldn1O88551 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Cldn1O88551 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cldn1O88551 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.69□□□□□ -0.38
Cldn1O88551 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.69□□□□□ -0.38
Cldn1O88551 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cldn1O88551 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Cldn1O88551 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cldn1O88551 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Gm12490-201ENSMUST00000120255 560 ntBASIC12.68□□□□□ -0.38
Cldn1O88551 Gm15487-201ENSMUST00000122373 465 ntBASIC12.68□□□□□ -0.38
Cldn1O88551 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.68□□□□□ -0.38
Cldn1O88551 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cldn1O88551 Gm10499-201ENSMUST00000174094 934 ntBASIC12.68□□□□□ -0.38
Cldn1O88551 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Gm8318-201ENSMUST00000182954 872 ntBASIC12.68□□□□□ -0.38
Cldn1O88551 Gm18187-201ENSMUST00000196476 984 ntBASIC12.68□□□□□ -0.38
Cldn1O88551 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn1O88551 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.68□□□□□ -0.38
Cldn1O88551 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Cldn1O88551 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Cldn1O88551 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.68□□□□□ -0.38
Cldn1O88551 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms