Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.6□□□□□ -0.07
Pdlim1O70400 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim1O70400 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Pdlim1O70400 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim1O70400 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pdlim1O70400 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.59□□□□□ -0.07
Pdlim1O70400 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim1O70400 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.59□□□□□ -0.07
Pdlim1O70400 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim1O70400 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pdlim1O70400 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.59□□□□□ -0.07
Pdlim1O70400 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim1O70400 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim1O70400 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim1O70400 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim1O70400 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.59□□□□□ -0.07
Pdlim1O70400 Gm6736-201ENSMUST00000166583 948 ntBASIC14.59□□□□□ -0.07
Pdlim1O70400 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.59□□□□□ -0.07
Pdlim1O70400 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.59□□□□□ -0.07
Pdlim1O70400 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.59□□□□□ -0.07
Pdlim1O70400 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim1O70400 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim1O70400 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim1O70400 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.59□□□□□ -0.07
Pdlim1O70400 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Pdlim1O70400 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim1O70400 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim1O70400 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim1O70400 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Pdlim1O70400 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim1O70400 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim1O70400 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pdlim1O70400 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pdlim1O70400 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pdlim1O70400 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pdlim1O70400 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.58□□□□□ -0.07
Pdlim1O70400 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Pdlim1O70400 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pdlim1O70400 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pdlim1O70400 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.58□□□□□ -0.08
Pdlim1O70400 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.58□□□□□ -0.08
Pdlim1O70400 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Pdlim1O70400 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Pdlim1O70400 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.58□□□□□ -0.08
Pdlim1O70400 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.58□□□□□ -0.08
Pdlim1O70400 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.58□□□□□ -0.08
Pdlim1O70400 Gm15483-201ENSMUST00000120338 456 ntBASIC14.58□□□□□ -0.08
Pdlim1O70400 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.58□□□□□ -0.08
Pdlim1O70400 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.58□□□□□ -0.08
Pdlim1O70400 Gm2451-201ENSMUST00000199447 999 ntBASIC14.58□□□□□ -0.08
Pdlim1O70400 Gm10290-201ENSMUST00000200451 999 ntBASIC14.58□□□□□ -0.08
Pdlim1O70400 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.58□□□□□ -0.08
Pdlim1O70400 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.58□□□□□ -0.08
Pdlim1O70400 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.58□□□□□ -0.08
Pdlim1O70400 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.58□□□□□ -0.08
Pdlim1O70400 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pdlim1O70400 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pdlim1O70400 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pdlim1O70400 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.57□□□□□ -0.08
Pdlim1O70400 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.57□□□□□ -0.08
Pdlim1O70400 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.57□□□□□ -0.08
Pdlim1O70400 Olfr286-202ENSMUST00000205305 969 ntBASIC14.57□□□□□ -0.08
Pdlim1O70400 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.57□□□□□ -0.08
Pdlim1O70400 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.57□□□□□ -0.08
Pdlim1O70400 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim1O70400 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms