Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.92□□□□□ -0.02
Chrna4O70174 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Chrna4O70174 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna4O70174 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.92□□□□□ -0.02
Chrna4O70174 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Chrna4O70174 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chrna4O70174 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna4O70174 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna4O70174 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chrna4O70174 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna4O70174 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna4O70174 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna4O70174 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna4O70174 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chrna4O70174 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.92□□□□□ -0.02
Chrna4O70174 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Chrna4O70174 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Chrna4O70174 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.91□□□□□ -0.02
Chrna4O70174 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Chrna4O70174 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.91□□□□□ -0.02
Chrna4O70174 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Gm15467-201ENSMUST00000120582 445 ntBASIC14.91□□□□□ -0.02
Chrna4O70174 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Chrna4O70174 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Chrna4O70174 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Chrna4O70174 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Chrna4O70174 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna4O70174 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.91□□□□□ -0.02
Chrna4O70174 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.9□□□□□ -0.02
Chrna4O70174 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.9□□□□□ -0.02
Chrna4O70174 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.9□□□□□ -0.02
Chrna4O70174 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Chrna4O70174 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.9□□□□□ -0.02
Chrna4O70174 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 Mir8117-201ENSMUST00000184773 107 ntBASIC14.9□□□□□ -0.02
Chrna4O70174 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.9□□□□□ -0.02
Chrna4O70174 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.9□□□□□ -0.02
Chrna4O70174 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Chrna4O70174 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Chrna4O70174 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Chrna4O70174 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Chrna4O70174 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.9□□□□□ -0.02
Chrna4O70174 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.9□□□□□ -0.02
Chrna4O70174 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.9□□□□□ -0.02
Chrna4O70174 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna4O70174 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Chrna4O70174 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Chrna4O70174 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Chrna4O70174 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.89□□□□□ -0.03
Chrna4O70174 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.89□□□□□ -0.03
Chrna4O70174 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Chrna4O70174 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Chrna4O70174 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna4O70174 Gm13464-201ENSMUST00000119418 935 ntBASIC14.89□□□□□ -0.03
Chrna4O70174 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.89□□□□□ -0.03
Chrna4O70174 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.89□□□□□ -0.03
Chrna4O70174 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms