Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp8O70138 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.01■□□□□ 0.47
Mmp8O70138 Gm45133-201ENSMUST00000207548 2773 ntBASIC18.01■□□□□ 0.47
Mmp8O70138 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp8O70138 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp8O70138 Gm23935-201ENSMUST00000102303 57 ntBASIC18.01■□□□□ 0.47
Mmp8O70138 Gm24270-201ENSMUST00000102326 57 ntBASIC18.01■□□□□ 0.47
Mmp8O70138 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.01■□□□□ 0.47
Mmp8O70138 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp8O70138 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Mmp8O70138 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp8O70138 Gm24245-201ENSMUST00000157318 57 ntBASIC18.01■□□□□ 0.47
Mmp8O70138 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC18.01■□□□□ 0.47
Mmp8O70138 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp8O70138 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Mmp8O70138 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp8O70138 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp8O70138 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp8O70138 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp8O70138 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp8O70138 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp8O70138 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Mmp8O70138 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp8O70138 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Mmp8O70138 Gm6018-201ENSMUST00000216090 1306 ntBASIC18■□□□□ 0.47
Mmp8O70138 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp8O70138 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp8O70138 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC18■□□□□ 0.47
Mmp8O70138 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18■□□□□ 0.47
Mmp8O70138 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18■□□□□ 0.47
Mmp8O70138 Gm23547-201ENSMUST00000158210 271 ntBASIC18■□□□□ 0.47
Mmp8O70138 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18■□□□□ 0.47
Mmp8O70138 Gm43575-201ENSMUST00000196420 516 ntBASIC18■□□□□ 0.47
Mmp8O70138 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18■□□□□ 0.47
Mmp8O70138 Gm45504-201ENSMUST00000211407 2107 ntBASIC18■□□□□ 0.47
Mmp8O70138 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18■□□□□ 0.47
Mmp8O70138 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp8O70138 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp8O70138 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp8O70138 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp8O70138 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mmp8O70138 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC18■□□□□ 0.47
Mmp8O70138 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Mmp8O70138 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.99■□□□□ 0.47
Mmp8O70138 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.99■□□□□ 0.47
Mmp8O70138 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp8O70138 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp8O70138 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp8O70138 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Mmp8O70138 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp8O70138 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp8O70138 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp8O70138 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp8O70138 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.99■□□□□ 0.47
Mmp8O70138 Mir6990-201ENSMUST00000183724 91 ntBASIC17.99■□□□□ 0.47
Mmp8O70138 Gm44335-201ENSMUST00000196879 141 ntBASIC17.99■□□□□ 0.47
Mmp8O70138 Gm44297-201ENSMUST00000198304 141 ntBASIC17.99■□□□□ 0.47
Mmp8O70138 Gm44346-201ENSMUST00000198851 141 ntBASIC17.99■□□□□ 0.47
Mmp8O70138 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.99■□□□□ 0.47
Mmp8O70138 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp8O70138 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Mmp8O70138 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Mmp8O70138 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Mmp8O70138 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp8O70138 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Mmp8O70138 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.99■□□□□ 0.47
Mmp8O70138 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp8O70138 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp8O70138 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp8O70138 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mmp8O70138 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Mmp8O70138 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.98■□□□□ 0.47
Mmp8O70138 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.98■□□□□ 0.47
Mmp8O70138 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.98■□□□□ 0.47
Mmp8O70138 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Mmp8O70138 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.98■□□□□ 0.47
Mmp8O70138 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Mmp8O70138 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.98■□□□□ 0.47
Mmp8O70138 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mmp8O70138 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.97■□□□□ 0.47
Mmp8O70138 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp8O70138 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mmp8O70138 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms