Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SncaO55042 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.27□□□□□ -0.44
SncaO55042 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SncaO55042 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.27□□□□□ -0.45
SncaO55042 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SncaO55042 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SncaO55042 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SncaO55042 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SncaO55042 Gm17807-201ENSMUST00000186869 298 ntBASIC12.27□□□□□ -0.45
SncaO55042 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
SncaO55042 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SncaO55042 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SncaO55042 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SncaO55042 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
SncaO55042 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SncaO55042 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SncaO55042 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SncaO55042 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SncaO55042 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SncaO55042 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SncaO55042 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SncaO55042 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SncaO55042 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SncaO55042 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SncaO55042 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SncaO55042 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SncaO55042 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SncaO55042 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.27□□□□□ -0.45
SncaO55042 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SncaO55042 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SncaO55042 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SncaO55042 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.26□□□□□ -0.45
SncaO55042 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SncaO55042 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.26□□□□□ -0.45
SncaO55042 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SncaO55042 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SncaO55042 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.26□□□□□ -0.45
SncaO55042 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.26□□□□□ -0.45
SncaO55042 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.26□□□□□ -0.45
SncaO55042 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SncaO55042 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.25□□□□□ -0.45
SncaO55042 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SncaO55042 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.25□□□□□ -0.45
SncaO55042 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Gm10499-201ENSMUST00000174094 934 ntBASIC12.25□□□□□ -0.45
SncaO55042 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.25□□□□□ -0.45
SncaO55042 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.25□□□□□ -0.45
SncaO55042 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
SncaO55042 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SncaO55042 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.25□□□□□ -0.45
SncaO55042 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SncaO55042 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SncaO55042 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SncaO55042 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SncaO55042 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SncaO55042 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SncaO55042 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SncaO55042 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SncaO55042 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms