Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.24□□□□□ -0.13
Cacna1bO55017 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.24□□□□□ -0.13
Cacna1bO55017 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Gm27892-201ENSMUST00000185017 106 ntBASIC14.24□□□□□ -0.13
Cacna1bO55017 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.24□□□□□ -0.13
Cacna1bO55017 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.24□□□□□ -0.13
Cacna1bO55017 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Cacna1bO55017 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.24□□□□□ -0.13
Cacna1bO55017 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.24□□□□□ -0.13
Cacna1bO55017 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Gm9797-201ENSMUST00000052902 613 ntBASIC14.24□□□□□ -0.13
Cacna1bO55017 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cacna1bO55017 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cacna1bO55017 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Cacna1bO55017 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cacna1bO55017 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.23□□□□□ -0.13
Cacna1bO55017 Gm16476-201ENSMUST00000221544 139 ntBASIC14.23□□□□□ -0.13
Cacna1bO55017 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cacna1bO55017 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Cacna1bO55017 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.23□□□□□ -0.13
Cacna1bO55017 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cacna1bO55017 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Mir1897-201ENSMUST00000122581 272 ntBASIC14.23□□□□□ -0.13
Cacna1bO55017 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.23□□□□□ -0.13
Cacna1bO55017 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1bO55017 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cacna1bO55017 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cacna1bO55017 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cacna1bO55017 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.22□□□□□ -0.13
Cacna1bO55017 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.22□□□□□ -0.13
Cacna1bO55017 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.22□□□□□ -0.13
Cacna1bO55017 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.22□□□□□ -0.13
Cacna1bO55017 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cacna1bO55017 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Cacna1bO55017 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1bO55017 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1bO55017 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cacna1bO55017 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cacna1bO55017 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1bO55017 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.21□□□□□ -0.13
Cacna1bO55017 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1bO55017 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1bO55017 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1bO55017 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1bO55017 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1bO55017 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.21□□□□□ -0.13
Cacna1bO55017 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1bO55017 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1bO55017 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.21□□□□□ -0.13
Cacna1bO55017 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.21□□□□□ -0.13
Cacna1bO55017 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.21□□□□□ -0.13
Cacna1bO55017 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms