Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.25■□□□□ 0.19
Prom1O54990 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.25■□□□□ 0.19
Prom1O54990 Gm12490-201ENSMUST00000120255 560 ntBASIC16.25■□□□□ 0.19
Prom1O54990 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.25■□□□□ 0.19
Prom1O54990 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Prom1O54990 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.25■□□□□ 0.19
Prom1O54990 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Prom1O54990 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prom1O54990 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Prom1O54990 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Prom1O54990 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Prom1O54990 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Prom1O54990 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.24■□□□□ 0.19
Prom1O54990 Gm37230-201ENSMUST00000194491 818 ntBASIC16.24■□□□□ 0.19
Prom1O54990 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Prom1O54990 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Prom1O54990 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.24■□□□□ 0.19
Prom1O54990 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
Prom1O54990 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prom1O54990 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Prom1O54990 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Prom1O54990 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.23■□□□□ 0.19
Prom1O54990 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prom1O54990 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prom1O54990 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Prom1O54990 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prom1O54990 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prom1O54990 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Prom1O54990 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Prom1O54990 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prom1O54990 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prom1O54990 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.23■□□□□ 0.19
Prom1O54990 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.23■□□□□ 0.19
Prom1O54990 Gm42612-201ENSMUST00000197986 623 ntBASIC16.23■□□□□ 0.19
Prom1O54990 Gm43170-201ENSMUST00000199827 612 ntBASIC16.23■□□□□ 0.19
Prom1O54990 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.23■□□□□ 0.19
Prom1O54990 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.23■□□□□ 0.19
Prom1O54990 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prom1O54990 BC037039-201ENSMUST00000192003 2205 ntBASIC16.23■□□□□ 0.19
Prom1O54990 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.23■□□□□ 0.19
Prom1O54990 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prom1O54990 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prom1O54990 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Prom1O54990 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prom1O54990 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prom1O54990 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Prom1O54990 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Prom1O54990 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Prom1O54990 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Prom1O54990 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prom1O54990 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms