Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Smarce1O54941 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.59■□□□□ 0.41
Smarce1O54941 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Smarce1O54941 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Smarce1O54941 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
Smarce1O54941 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.59■□□□□ 0.41
Smarce1O54941 Ank2-226ENSMUST00000189368 339 ntBASIC17.59■□□□□ 0.41
Smarce1O54941 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarce1O54941 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smarce1O54941 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Smarce1O54941 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Smarce1O54941 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.58■□□□□ 0.41
Smarce1O54941 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.58■□□□□ 0.41
Smarce1O54941 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smarce1O54941 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Smarce1O54941 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarce1O54941 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Smarce1O54941 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarce1O54941 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Smarce1O54941 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.58■□□□□ 0.4
Smarce1O54941 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.58■□□□□ 0.4
Smarce1O54941 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarce1O54941 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Smarce1O54941 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
Smarce1O54941 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Smarce1O54941 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarce1O54941 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarce1O54941 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarce1O54941 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarce1O54941 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Smarce1O54941 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarce1O54941 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarce1O54941 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarce1O54941 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Smarce1O54941 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Smarce1O54941 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.57■□□□□ 0.4
Smarce1O54941 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.57■□□□□ 0.4
Smarce1O54941 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smarce1O54941 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.57■□□□□ 0.4
Smarce1O54941 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.57■□□□□ 0.4
Smarce1O54941 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.57■□□□□ 0.4
Smarce1O54941 Gm28033-201ENSMUST00000184224 96 ntBASIC17.57■□□□□ 0.4
Smarce1O54941 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Birc2-201ENSMUST00000054878 378 ntBASIC17.57■□□□□ 0.4
Smarce1O54941 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Smarce1O54941 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Smarce1O54941 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarce1O54941 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarce1O54941 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarce1O54941 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarce1O54941 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarce1O54941 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarce1O54941 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Smarce1O54941 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarce1O54941 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarce1O54941 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Smarce1O54941 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarce1O54941 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Smarce1O54941 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Smarce1O54941 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarce1O54941 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms