Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.44□□□□□ -0.1
Npc1O35604 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Npc1O35604 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.44□□□□□ -0.1
Npc1O35604 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Npc1O35604 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.44□□□□□ -0.1
Npc1O35604 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.44□□□□□ -0.1
Npc1O35604 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Npc1O35604 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.44□□□□□ -0.1
Npc1O35604 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.44□□□□□ -0.1
Npc1O35604 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Npc1O35604 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Npc1O35604 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Npc1O35604 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Npc1O35604 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Npc1O35604 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.43□□□□□ -0.1
Npc1O35604 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Rprl2-201ENSMUST00000157150 290 ntBASIC14.43□□□□□ -0.1
Npc1O35604 Rpph1-201ENSMUST00000175096 319 ntBASIC14.43□□□□□ -0.1
Npc1O35604 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.43□□□□□ -0.1
Npc1O35604 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Npc1O35604 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Npc1O35604 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Npc1O35604 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Npc1O35604 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Npc1O35604 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Npc1O35604 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Npc1O35604 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Npc1O35604 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.42□□□□□ -0.1
Npc1O35604 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Gm16026-204ENSMUST00000162652 683 ntBASIC14.42□□□□□ -0.1
Npc1O35604 Gm18737-201ENSMUST00000173594 937 ntBASIC14.42□□□□□ -0.1
Npc1O35604 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Npc1O35604 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.42□□□□□ -0.1
Npc1O35604 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.42□□□□□ -0.1
Npc1O35604 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.42□□□□□ -0.1
Npc1O35604 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Npc1O35604 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npc1O35604 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Npc1O35604 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Npc1O35604 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Npc1O35604 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Npc1O35604 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Npc1O35604 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Npc1O35604 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms