Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.8□□□□□ -0.36
Gfra3O35118 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.8□□□□□ -0.36
Gfra3O35118 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.8□□□□□ -0.36
Gfra3O35118 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.8□□□□□ -0.36
Gfra3O35118 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Gfra3O35118 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Gfra3O35118 Gm12849-201ENSMUST00000120013 739 ntBASIC12.8□□□□□ -0.36
Gfra3O35118 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.8□□□□□ -0.36
Gfra3O35118 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Gfra3O35118 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.8□□□□□ -0.36
Gfra3O35118 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gfra3O35118 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.8□□□□□ -0.36
Gfra3O35118 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.8□□□□□ -0.36
Gfra3O35118 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.8□□□□□ -0.36
Gfra3O35118 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.8□□□□□ -0.36
Gfra3O35118 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.8□□□□□ -0.36
Gfra3O35118 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Gfra3O35118 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.8□□□□□ -0.36
Gfra3O35118 BC037039-201ENSMUST00000192003 2205 ntBASIC12.8□□□□□ -0.36
Gfra3O35118 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gfra3O35118 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gfra3O35118 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gfra3O35118 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gfra3O35118 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Gfra3O35118 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gfra3O35118 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gfra3O35118 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gfra3O35118 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gfra3O35118 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gfra3O35118 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.79□□□□□ -0.36
Gfra3O35118 Gm14363-201ENSMUST00000122304 409 ntBASIC12.79□□□□□ -0.36
Gfra3O35118 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
Gfra3O35118 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.79□□□□□ -0.36
Gfra3O35118 Gm43474-201ENSMUST00000196415 774 ntBASIC12.79□□□□□ -0.36
Gfra3O35118 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gfra3O35118 Gm43125-201ENSMUST00000201724 730 ntBASIC12.79□□□□□ -0.36
Gfra3O35118 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC12.79□□□□□ -0.36
Gfra3O35118 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.79□□□□□ -0.36
Gfra3O35118 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gfra3O35118 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gfra3O35118 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gfra3O35118 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gfra3O35118 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gfra3O35118 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gfra3O35118 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gfra3O35118 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gfra3O35118 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gfra3O35118 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gfra3O35118 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gfra3O35118 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gfra3O35118 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gfra3O35118 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.78□□□□□ -0.36
Gfra3O35118 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.78□□□□□ -0.36
Gfra3O35118 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.78□□□□□ -0.36
Gfra3O35118 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gfra3O35118 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.78□□□□□ -0.36
Gfra3O35118 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.78□□□□□ -0.36
Gfra3O35118 Gm15483-201ENSMUST00000120338 456 ntBASIC12.78□□□□□ -0.36
Gfra3O35118 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.78□□□□□ -0.36
Gfra3O35118 Gm45878-201ENSMUST00000211839 241 ntBASIC12.78□□□□□ -0.36
Gfra3O35118 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.78□□□□□ -0.36
Gfra3O35118 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms