Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trove2O08848 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trove2O08848 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trove2O08848 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trove2O08848 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.22■□□□□ 0.03
Trove2O08848 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.22■□□□□ 0.03
Trove2O08848 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.22■□□□□ 0.03
Trove2O08848 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.22■□□□□ 0.03
Trove2O08848 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trove2O08848 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trove2O08848 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trove2O08848 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trove2O08848 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trove2O08848 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trove2O08848 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.22■□□□□ 0.03
Trove2O08848 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trove2O08848 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trove2O08848 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trove2O08848 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trove2O08848 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trove2O08848 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trove2O08848 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trove2O08848 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trove2O08848 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trove2O08848 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trove2O08848 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.21■□□□□ 0.03
Trove2O08848 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trove2O08848 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.21■□□□□ 0.03
Trove2O08848 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trove2O08848 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
Trove2O08848 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trove2O08848 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trove2O08848 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trove2O08848 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.21■□□□□ 0.03
Trove2O08848 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trove2O08848 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.21■□□□□ 0.03
Trove2O08848 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trove2O08848 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.21■□□□□ 0.03
Trove2O08848 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trove2O08848 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trove2O08848 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trove2O08848 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trove2O08848 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trove2O08848 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trove2O08848 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.21■□□□□ 0.02
Trove2O08848 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trove2O08848 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trove2O08848 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trove2O08848 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trove2O08848 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trove2O08848 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.2■□□□□ 0.02
Trove2O08848 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trove2O08848 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.2■□□□□ 0.02
Trove2O08848 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trove2O08848 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.2■□□□□ 0.02
Trove2O08848 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Trove2O08848 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trove2O08848 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.2■□□□□ 0.02
Trove2O08848 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trove2O08848 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trove2O08848 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trove2O08848 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Trove2O08848 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trove2O08848 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.19■□□□□ 0.02
Trove2O08848 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trove2O08848 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Gm12497-201ENSMUST00000138778 237 ntBASIC15.19■□□□□ 0.02
Trove2O08848 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.19■□□□□ 0.02
Trove2O08848 Ank2-226ENSMUST00000189368 339 ntBASIC15.19■□□□□ 0.02
Trove2O08848 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trove2O08848 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.19■□□□□ 0.02
Trove2O08848 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.19■□□□□ 0.02
Trove2O08848 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms