Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ebf3O08791 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ebf3O08791 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ebf3O08791 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ebf3O08791 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ebf3O08791 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ebf3O08791 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ebf3O08791 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ebf3O08791 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ebf3O08791 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Ebf3O08791 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.38■□□□□ 0.05
Ebf3O08791 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ebf3O08791 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ebf3O08791 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ebf3O08791 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ebf3O08791 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.38■□□□□ 0.05
Ebf3O08791 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.38■□□□□ 0.05
Ebf3O08791 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ebf3O08791 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.38■□□□□ 0.05
Ebf3O08791 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ebf3O08791 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ebf3O08791 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.38■□□□□ 0.05
Ebf3O08791 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ebf3O08791 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ebf3O08791 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.38■□□□□ 0.05
Ebf3O08791 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ebf3O08791 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ebf3O08791 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ebf3O08791 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ebf3O08791 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ebf3O08791 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ebf3O08791 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ebf3O08791 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ebf3O08791 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.37■□□□□ 0.05
Ebf3O08791 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ebf3O08791 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ebf3O08791 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ebf3O08791 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ebf3O08791 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.37■□□□□ 0.05
Ebf3O08791 Gm5186-201ENSMUST00000218781 920 ntBASIC15.37■□□□□ 0.05
Ebf3O08791 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ebf3O08791 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ebf3O08791 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ebf3O08791 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ebf3O08791 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ebf3O08791 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ebf3O08791 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ebf3O08791 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Ebf3O08791 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ebf3O08791 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ebf3O08791 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ebf3O08791 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ebf3O08791 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ebf3O08791 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Ebf3O08791 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ebf3O08791 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ebf3O08791 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.36■□□□□ 0.05
Ebf3O08791 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.36■□□□□ 0.05
Ebf3O08791 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.36■□□□□ 0.05
Ebf3O08791 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ebf3O08791 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ebf3O08791 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.36■□□□□ 0.05
Ebf3O08791 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.36■□□□□ 0.05
Ebf3O08791 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.36■□□□□ 0.05
Ebf3O08791 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.36■□□□□ 0.05
Ebf3O08791 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.36■□□□□ 0.05
Ebf3O08791 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.36■□□□□ 0.05
Ebf3O08791 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.36■□□□□ 0.05
Ebf3O08791 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ebf3O08791 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.36■□□□□ 0.05
Ebf3O08791 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.36■□□□□ 0.05
Ebf3O08791 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.36■□□□□ 0.05
Ebf3O08791 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ebf3O08791 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.36■□□□□ 0.05
Ebf3O08791 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf3O08791 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ebf3O08791 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf3O08791 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ebf3O08791 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf3O08791 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf3O08791 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf3O08791 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf3O08791 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms