Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClockO08785 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClockO08785 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ClockO08785 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClockO08785 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ClockO08785 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
ClockO08785 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.07□□□□□ -0.16
ClockO08785 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.07□□□□□ -0.16
ClockO08785 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
ClockO08785 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.07□□□□□ -0.16
ClockO08785 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.07□□□□□ -0.16
ClockO08785 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Gm25016-201ENSMUST00000158399 131 ntBASIC14.07□□□□□ -0.16
ClockO08785 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.07□□□□□ -0.16
ClockO08785 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.07□□□□□ -0.16
ClockO08785 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.07□□□□□ -0.16
ClockO08785 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.07□□□□□ -0.16
ClockO08785 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.07□□□□□ -0.16
ClockO08785 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ClockO08785 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.07□□□□□ -0.16
ClockO08785 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ClockO08785 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ClockO08785 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.06□□□□□ -0.16
ClockO08785 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ClockO08785 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ClockO08785 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ClockO08785 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.06□□□□□ -0.16
ClockO08785 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.06□□□□□ -0.16
ClockO08785 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.06□□□□□ -0.16
ClockO08785 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.06□□□□□ -0.16
ClockO08785 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
ClockO08785 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.06□□□□□ -0.16
ClockO08785 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClockO08785 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ClockO08785 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ClockO08785 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.05□□□□□ -0.16
ClockO08785 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.05□□□□□ -0.16
ClockO08785 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ClockO08785 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.05□□□□□ -0.16
ClockO08785 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.05□□□□□ -0.16
ClockO08785 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ClockO08785 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
ClockO08785 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.05□□□□□ -0.16
ClockO08785 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ClockO08785 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClockO08785 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms